Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
LOC102724428A0A0B4J2F2 LYARP1-201ENST00000436977 1501 ntBASIC8.48□□□□□ -1.05
LOC102724428A0A0B4J2F2 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC008555.1-201ENST00000561778 2757 ntBASIC8.48□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.48□□□□□ -1.05
LOC102724428A0A0B4J2F2 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
LOC102724428A0A0B4J2F2 XRCC6P5-201ENST00000435236 1795 ntBASIC8.48□□□□□ -1.05
LOC102724428A0A0B4J2F2 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LOC102724428A0A0B4J2F2 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
LOC102724428A0A0B4J2F2 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.48□□□□□ -1.05
LOC102724428A0A0B4J2F2 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC099786.3-201ENST00000565735 1410 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AL355615.1-201ENST00000406187 641 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 QRSL1P2-201ENST00000418582 964 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AL365396.1-201ENST00000430854 671 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 TRIM60P9Y-201ENST00000438459 816 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AL138878.2-201ENST00000440581 1241 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 XKRY2-201ENST00000442362 1093 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AL355355.1-201ENST00000442900 793 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 TRIM60P11Y-201ENST00000445313 801 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC010240.2-201ENST00000445363 1205 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 CEACAMP5-201ENST00000448037 961 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC009963.3-201ENST00000458090 486 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC104109.1-201ENST00000498563 436 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 MTCYBP37-201ENST00000510642 1133 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 OR5BM1P-201ENST00000512021 366 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC011352.2-201ENST00000514574 1016 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 RN7SKP35-201ENST00000517210 151 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 TRIM77BP-201ENST00000524985 1119 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 OR7E128P-201ENST00000532736 1024 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AL391156.1-201ENST00000554965 554 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 CYCSP38-201ENST00000559840 322 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC084373.1-201ENST00000603311 235 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC245297.2-201ENST00000610119 565 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AL355073.2-201ENST00000612106 557 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 IGKV2OR2-10-201ENST00000613976 311 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC006338.2-201ENST00000616864 791 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC104581.5-201ENST00000624171 7141 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 HCG18-244ENST00000602516 2890 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC009501.3-201ENST00000605001 1352 ntBASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.47□□□□□ -1.05
LOC102724428A0A0B4J2F2 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LOC102724428A0A0B4J2F2 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
LOC102724428A0A0B4J2F2 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.05
LOC102724428A0A0B4J2F2 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.46□□□□□ -1.05
LOC102724428A0A0B4J2F2 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
LOC102724428A0A0B4J2F2 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.46□□□□□ -1.05
LOC102724428A0A0B4J2F2 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
LOC102724428A0A0B4J2F2 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LOC102724428A0A0B4J2F2 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
LOC102724428A0A0B4J2F2 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 RPL12P13-201ENST00000310055 497 ntBASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 AL157702.1-201ENST00000398764 426 ntBASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 RPL5P20-201ENST00000403848 896 ntBASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 LSM5-203ENST00000409782 649 ntTSL 5 BASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 DNAJA1P1-201ENST00000425106 1187 ntBASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 RPL5P34-201ENST00000426545 891 ntBASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 AL035407.1-201ENST00000429211 571 ntBASIC8.46□□□□□ -1.06
LOC102724428A0A0B4J2F2 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms