Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC011933.2-201ENST00000578539 2790 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AL137141.1-201ENST00000624622 4836 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 RNU1-134P-201ENST00000362935 165 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 RN7SKP128-201ENST00000364270 303 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 RNA5SP211-201ENST00000365516 117 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 MIR551B-201ENST00000384984 96 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 KRT8P51-201ENST00000438938 274 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 FTLP8-201ENST00000446770 267 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 PFN1P6-201ENST00000476786 399 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC093719.1-201ENST00000480427 441 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC005017.1-201ENST00000482002 490 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AP002453.1-201ENST00000492327 668 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 SNRPCP11-201ENST00000492453 205 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 ST13P12-201ENST00000508958 1094 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 GUSBP9-201ENST00000510138 584 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 OR7E158P-201ENST00000524483 910 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC090424.1-201ENST00000535243 736 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC007346.2-201ENST00000564816 892 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC004232.2-201ENST00000574245 821 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AL135999.3-201ENST00000610501 812 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AL355974.3-201ENST00000617383 467 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AL357562.1-201ENST00000624911 609 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 MSL3P1-202ENST00000440028 1468 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 MTCO1P28-201ENST00000574177 1528 ntBASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC078880.4-201ENST00000617627 1749 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 RNA5SP198-201ENST00000410376 127 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 RPL7AP51-201ENST00000422016 760 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC092865.3-201ENST00000425390 1026 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC130360.1-201ENST00000425489 1117 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC099677.3-201ENST00000427081 395 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AL356121.1-201ENST00000442911 156 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC115223.1-201ENST00000466377 870 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC079080.1-201ENST00000479841 822 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 RPL38P3-201ENST00000484463 213 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 RPL29P23-201ENST00000486188 442 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC090058.1-201ENST00000498788 435 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 NACAP5-201ENST00000509863 636 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 RNA5SP441-201ENST00000516809 88 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC130365.2-201ENST00000525882 1201 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 MT1CP-201ENST00000567054 174 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 MIR4420-201ENST00000583944 77 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AP001357.1-201ENST00000586304 1053 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 AC000095.2-202ENST00000637415 154 ntBASIC5.37□□□□□ -1.55
TRAV27A0A087WT01 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms