Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RN7SL170P-201ENST00000487098 295 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AC021006.1-201ENST00000489849 553 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AC091874.2-201ENST00000505889 720 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AC093524.1-201ENST00000564266 1094 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AP001823.1-201ENST00000604056 1003 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AL080312.2-201ENST00000613001 630 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AL352984.2-202ENST00000613699 155 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 CXADRP3-202ENST00000617265 1100 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AC073593.1-201ENST00000624500 411 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 DNM1P47-203ENST00000571780 12667 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AL078595.2-201ENST00000605309 1780 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AL121768.1-201ENST00000613917 2544 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC027279.1-201ENST00000568885 4284 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 RNA5SP110-201ENST00000362638 115 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AL451142.1-201ENST00000375867 775 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 OR2W4P-201ENST00000406496 926 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 RN7SKP151-201ENST00000410230 316 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 RPL7AP14-201ENST00000424041 802 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC092865.3-201ENST00000425390 1026 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AL354707.3-201ENST00000427308 331 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 PSMD10P2-201ENST00000432890 672 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 OR3D1P-201ENST00000438288 955 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 RPSAP40-201ENST00000442343 891 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC090958.1-201ENST00000511122 351 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 HSD3BP3-201ENST00000514706 994 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 RNA5SP434-201ENST00000516647 121 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 RN7SKP70-201ENST00000516655 271 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC011853.1-201ENST00000518911 454 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC084121.1-201ENST00000533882 835 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC090651.1-201ENST00000567865 634 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC027334.1-201ENST00000603257 310 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC141002.1-201ENST00000607025 279 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AL354950.1-201ENST00000614150 568 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC021422.1-201ENST00000621212 473 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC073592.6-201ENST00000624271 415 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 HSPD1P8-201ENST00000400121 1658 ntBASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4BQ9Y4P1 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 MIR621-201ENST00000384919 96 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 RNU6-316P-201ENST00000391027 107 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 RPL23AP18-201ENST00000416139 468 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 AC244033.1-201ENST00000426826 870 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms