Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AC020656.2-201ENST00000613291 5309 ntBASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AC137056.2-201ENST00000624055 1958 ntBASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AL136984.1-201ENST00000607611 1893 ntBASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 SNX18P3-202ENST00000565670 1750 ntBASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 SNORD8-201ENST00000363915 110 ntBASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 ATP5LP2-201ENST00000440646 311 ntBASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AC111000.5-201ENST00000506559 1178 ntBASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 LDHAP1-201ENST00000509421 992 ntBASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AC009120.3-201ENST00000563335 499 ntBASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AC024255.1-201ENST00000614376 102 ntBASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.73□□□□□ -1.49
NPIPA1Q9UND3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 RNA5SP346-201ENST00000363541 121 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 SNORA70H-201ENST00000383910 135 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 SNORA70J-201ENST00000384182 135 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 SNORA51.9-201ENST00000384295 124 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 NAP1L4P2-201ENST00000425958 899 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 RPS29P14-201ENST00000431518 171 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AC097463.1-201ENST00000447288 481 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 PPIAP7-201ENST00000454070 489 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AC023194.2-201ENST00000465398 406 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AP000620.1-201ENST00000527147 504 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AC079905.1-201ENST00000549280 475 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 MIR4701-201ENST00000583094 63 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AC073333.2-201ENST00000603589 769 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AC024589.2-201ENST00000605642 1294 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AL352984.2-201ENST00000611153 546 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 RFPL4AP6-201ENST00000616792 846 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 SNX18P12-201ENST00000624821 759 ntBASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NPIPA1Q9UND3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPIPA1Q9UND3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms