Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RN7SL230P-201ENST00000580835 303 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 AP001267.4-201ENST00000602598 545 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 AL135999.3-201ENST00000610501 812 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 AC015819.1-201ENST00000613588 663 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 RFPL4AP6-201ENST00000616792 846 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 RPL7P58-201ENST00000402913 758 ntBASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 AL132875.1-201ENST00000403623 949 ntBASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 AC092865.3-201ENST00000425390 1026 ntBASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 AC010240.2-201ENST00000445363 1205 ntBASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 SDC4P-201ENST00000453285 601 ntBASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 CR383658.1-201ENST00000514609 734 ntBASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 RN7SKP288-201ENST00000516227 268 ntBASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 AP001000.1-201ENST00000526843 742 ntBASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 AC005479.3-201ENST00000602790 431 ntBASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
VPS29Q9UBQ0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AC027575.3-201ENST00000583058 2747 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AL137141.1-201ENST00000624622 4836 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 RNU1-134P-201ENST00000362935 165 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AC245096.1-201ENST00000413104 546 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 NMD3P2-201ENST00000421815 761 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AC092651.1-201ENST00000426110 312 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AC073410.1-201ENST00000435125 589 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 HMGN1P17-201ENST00000513734 295 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 snoU109.5-201ENST00000516231 132 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 NPM1P42-201ENST00000560329 862 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AL078601.3-201ENST00000573303 535 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 MIR4701-201ENST00000583094 63 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 SMIM12P1-201ENST00000603004 274 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 uc_338.26-201ENST00000612659 160 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AL355974.3-201ENST00000617383 467 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AC063952.1-203ENST00000634410 658 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms