Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL20A1Q9P218 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 AC011815.2-201ENST00000618230 2021 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 FAM32BP-201ENST00000344033 333 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 RNA5SP350-201ENST00000363298 111 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 SUGT1P2-201ENST00000379452 992 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 RPL35AP31-201ENST00000418340 337 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 AJ239321.1-201ENST00000424255 564 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 AC011742.2-201ENST00000443818 352 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 RPS27AP3-201ENST00000453803 454 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 RPL31P53-201ENST00000457065 348 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 TRBV8-1-201ENST00000481590 279 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 RNA5SP438-201ENST00000516561 112 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 RPA2P3-201ENST00000533268 770 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 AC007956.1-201ENST00000555623 542 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 MTND4LP25-201ENST00000570218 163 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 AL137067.2-201ENST00000621202 131 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 AC112243.1-201ENST00000623949 3851 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 AC007406.5-201ENST00000570140 3170 ntBASIC7.01□□□□□ -1.29
COL20A1Q9P218 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.01□□□□□ -1.29
COL20A1Q9P218 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL20A1Q9P218 AC107980.1-201ENST00000558671 3355 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 CASC19-238ENST00000641523 1558 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7□□□□□ -1.29
COL20A1Q9P218 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
COL20A1Q9P218 HDAC1P2-201ENST00000453661 1398 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7□□□□□ -1.29
COL20A1Q9P218 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 RNU11-6P-201ENST00000391127 133 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7□□□□□ -1.29
COL20A1Q9P218 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 HMGN1P20-201ENST00000411849 300 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 AL096829.1-201ENST00000413677 457 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 NDUFA5P1-201ENST00000433858 341 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7□□□□□ -1.29
COL20A1Q9P218 AC073109.1-201ENST00000445066 978 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7□□□□□ -1.29
COL20A1Q9P218 AC073594.1-201ENST00000462065 364 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 RN7SL193P-201ENST00000491708 276 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7□□□□□ -1.29
COL20A1Q9P218 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7□□□□□ -1.29
COL20A1Q9P218 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7□□□□□ -1.29
COL20A1Q9P218 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7□□□□□ -1.29
COL20A1Q9P218 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7□□□□□ -1.29
COL20A1Q9P218 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7□□□□□ -1.29
COL20A1Q9P218 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7□□□□□ -1.29
COL20A1Q9P218 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7□□□□□ -1.29
COL20A1Q9P218 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7□□□□□ -1.29
COL20A1Q9P218 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7□□□□□ -1.29
COL20A1Q9P218 NPIPB1P-202ENST00000588786 828 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7□□□□□ -1.29
COL20A1Q9P218 AL357562.1-201ENST00000624911 609 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7□□□□□ -1.29
COL20A1Q9P218 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7□□□□□ -1.29
COL20A1Q9P218 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7□□□□□ -1.29
COL20A1Q9P218 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
COL20A1Q9P218 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms