Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AL356473.1-201ENST00000406203 1408 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 CUBNP3-201ENST00000457461 1784 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 CYP2G2P-201ENST00000594920 1485 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC008957.3-201ENST00000624112 2242 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 RNA5SP442-201ENST00000365050 107 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 MIR152-201ENST00000385212 87 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC233289.1-201ENST00000403700 508 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 Z86062.1-201ENST00000406773 777 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 RPL12P43-201ENST00000420608 499 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 DUTP4-201ENST00000424782 475 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC073052.1-201ENST00000440417 714 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 RPS19P6-201ENST00000441327 433 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AL158214.1-201ENST00000444423 404 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 NPM1P13-201ENST00000452663 865 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 SCDP1-201ENST00000455244 1081 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 MED28P7-201ENST00000456611 530 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 RPLP0P1-201ENST00000457002 361 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 RPL7AP30-201ENST00000482859 796 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC008410.1-201ENST00000483777 339 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC026826.1-201ENST00000493002 361 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC105391.1-201ENST00000503155 1045 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC111000.2-201ENST00000507775 550 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC103855.4-201ENST00000533158 265 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 OR7E161P-201ENST00000533722 967 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 SETP17-201ENST00000534163 817 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC023050.2-201ENST00000544968 387 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AL031846.1-201ENST00000560933 314 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AL589765.6-201ENST00000601909 549 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC063962.1-201ENST00000608199 521 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC006338.2-201ENST00000616864 791 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AC007671.2-201ENST00000637344 619 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 AL356585.10-201ENST00000641883 123 ntBASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SEC61A2Q9H9S3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SEC61A2Q9H9S3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SEC61A2Q9H9S3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SEC61A2Q9H9S3 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.23□□□□□ -1.41
SEC61A2Q9H9S3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
SEC61A2Q9H9S3 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SEC61A2Q9H9S3 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.23□□□□□ -1.41
SEC61A2Q9H9S3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.23□□□□□ -1.41
SEC61A2Q9H9S3 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms