Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AC073365.1-203ENST00000641055 1992 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 RBMY1HP-201ENST00000382759 1389 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 RNU1-134P-201ENST00000362935 165 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 RNA5SP279-201ENST00000365513 117 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 AC245096.1-201ENST00000413104 546 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 RPS7P8-201ENST00000418311 581 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 AKR1B10P1-201ENST00000425765 942 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 AC023141.3-201ENST00000436698 278 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 PPIAP7-201ENST00000454070 489 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 RN7SL254P-201ENST00000460609 284 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 AC021006.1-201ENST00000489849 553 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 RPL37P23-201ENST00000492641 294 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 RN7SKP67-201ENST00000515905 235 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 OR56A7P-201ENST00000524865 941 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 AP000620.1-201ENST00000527147 504 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 AL352984.2-201ENST00000611153 546 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 AC097641.3-201ENST00000613523 464 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 AC073593.1-201ENST00000624500 411 ntBASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCSER1Q9C0I3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AC022164.1-201ENST00000568767 2673 ntBASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AL121977.1-201ENST00000401636 979 ntBASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AL132875.1-201ENST00000403623 949 ntBASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 RPL5P7-201ENST00000444235 813 ntBASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 FTLP8-201ENST00000446770 267 ntBASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 HMGB1P7-201ENST00000450921 612 ntBASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 RN7SL170P-201ENST00000487098 295 ntBASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 MAST4-IT1-201ENST00000514241 658 ntBASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 RNA5SP116-201ENST00000516132 98 ntBASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CCSER1Q9C0I3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms