Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC012653.2-201ENST00000621880 420 ntBASIC6.32□□□□□ -1.4
TRIM4Q9C037 AL122023.1-201ENST00000622847 530 ntBASIC6.32□□□□□ -1.4
TRIM4Q9C037 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM4Q9C037 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM4Q9C037 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM4Q9C037 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM4Q9C037 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM4Q9C037 AC004158.1-201ENST00000564508 4319 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM4Q9C037 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM4Q9C037 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM4Q9C037 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM4Q9C037 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 RNA5SP77-201ENST00000365394 120 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 GCNT1P4-201ENST00000404096 329 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 RPL12P23-201ENST00000405880 490 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 CYCSP17-201ENST00000407870 315 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC091874.2-201ENST00000505889 720 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 SNX18P23-201ENST00000510867 677 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 IGHV3-57-201ENST00000520143 280 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC005519.1-201ENST00000554490 601 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC067773.1-201ENST00000603284 1094 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 AL157899.1-201ENST00000604110 936 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC061999.1-201ENST00000624454 177 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC000095.2-202ENST00000637415 154 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
TRIM4Q9C037 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM4Q9C037 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM4Q9C037 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM4Q9C037 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM4Q9C037 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.31□□□□□ -1.4
TRIM4Q9C037 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM4Q9C037 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM4Q9C037 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM4Q9C037 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC110373.1-201ENST00000505994 3505 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM4Q9C037 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM4Q9C037 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM4Q9C037 RN7SKP275-201ENST00000364626 301 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 RPS3P2-201ENST00000421346 701 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 GPN3P1-201ENST00000423883 535 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC108479.1-201ENST00000431142 427 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC003989.1-201ENST00000434569 565 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM4Q9C037 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC133965.1-201ENST00000452984 354 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 RPL23AP64-201ENST00000469465 435 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC092824.1-201ENST00000483524 576 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC090826.1-203ENST00000569235 490 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC016839.1-201ENST00000578162 867 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 MIR3614-201ENST00000581261 86 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 AL589765.6-201ENST00000601909 549 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 ZNF806-201ENST00000438300 1774 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms