Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 AC092724.1-201ENST00000624623 3397 ntBASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 GSG1-202ENST00000351606 1422 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 AL022578.1-201ENST00000439330 1433 ntBASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 VIPR1-AS1-201ENST00000452639 1435 ntTSL 5 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 AC108099.1-201ENST00000564402 3258 ntBASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 AC016251.2-201ENST00000623393 3089 ntBASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 LINC01588-217ENST00000635379 1595 ntTSL 5 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 PGCP1-202ENST00000436252 1358 ntBASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 AC074198.1-201ENST00000506546 1397 ntBASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 AL359922.2-201ENST00000581788 3017 ntBASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 AC006378.2-201ENST00000623178 2476 ntBASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 AC011008.2-201ENST00000624866 3352 ntBASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE3DQ9BYE3 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 AL355974.1-201ENST00000618896 1708 ntBASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 AC135731.2-201ENST00000603029 2098 ntBASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 CASC19-284ENST00000642142 1868 ntBASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 AC018628.1-201ENST00000624147 3819 ntBASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 AC022031.1-201ENST00000585985 2593 ntBASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 AC005332.9-201ENST00000620266 2921 ntBASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 EEF1A1P12-201ENST00000443590 1346 ntBASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 CDYLP1-201ENST00000419017 1458 ntBASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 SPATA31C1-201ENST00000420021 3895 ntBASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 ZNF431-207ENST00000600692 1971 ntTSL 5 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 EIF3K-201ENST00000248342 864 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
LCE3DQ9BYE3 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms