Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC106730.3-201ENST00000624568 641 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AL049767.1-202ENST00000637826 242 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC024341.1-201ENST00000526444 1552 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 AC005332.9-201ENST00000620266 2921 ntBASIC7.61□□□□□ -1.19
RTFDC1Q9BY42 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 OR6K3-202ENST00000368146 996 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AL354890.1-201ENST00000413730 346 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AC017019.1-201ENST00000426129 261 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AC064862.4-201ENST00000442180 334 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AL355355.1-201ENST00000442900 793 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 SNORA58-201ENST00000505219 137 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AC008638.1-201ENST00000506035 866 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 Y_RNA.710-201ENST00000516975 110 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AC104997.1-201ENST00000519761 717 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AP000662.1-201ENST00000530952 487 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AC051619.2-201ENST00000559063 397 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AC010547.7-201ENST00000570323 333 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 FAM60CP-201ENST00000591086 664 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AL356752.1-201ENST00000615844 593 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 MIR6826-201ENST00000617808 98 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 SHQ1P1-201ENST00000437111 1544 ntBASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.6□□□□□ -1.19
RTFDC1Q9BY42 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AL132656.3-201ENST00000606384 1595 ntBASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AL929601.4-201ENST00000613011 1341 ntBASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 MIR143-201ENST00000385300 106 ntBASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 GLS-203ENST00000409215 632 ntTSL 4 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 RN7SKP286-201ENST00000410894 299 ntBASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 SDHDP6-201ENST00000414693 480 ntBASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 GTF3AP1-201ENST00000416942 1004 ntBASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 RPSAP39-201ENST00000467439 883 ntBASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AC092824.1-201ENST00000483524 576 ntBASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AL136038.1-201ENST00000497246 351 ntBASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 ZNF322P1-201ENST00000568013 1209 ntBASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC7.59□□□□□ -1.19
RTFDC1Q9BY42 COX6CP7-201ENST00000597056 208 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms