Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 MTND6P15-201ENST00000441157 521 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC104843.1-201ENST00000451203 319 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 RPL26P28-201ENST00000451325 435 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 USP9YP23-201ENST00000455085 407 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC103563.5-201ENST00000455643 364 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 SNORD19B-201ENST00000459623 84 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 RPSAP48-201ENST00000466509 889 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC004801.2-201ENST00000468202 779 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 RPL10AP1-201ENST00000490023 643 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC023194.1-201ENST00000493084 308 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC112204.1-201ENST00000502591 103 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC139272.1-201ENST00000505516 640 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 RNU6-1004P-201ENST00000516584 111 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 RNU6-445P-201ENST00000516949 107 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 RNU6-1261P-201ENST00000517194 104 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 IGHV3-36-201ENST00000520848 401 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC078962.3-201ENST00000545821 482 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC005632.1-201ENST00000550637 576 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC034105.3-201ENST00000565294 442 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 FRG2JP-201ENST00000568299 832 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC073869.3-201ENST00000609270 580 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AP006248.2-201ENST00000623309 592 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 SEM1-223ENST00000623498 582 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 TADA2A-202ENST00000612272 1948 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC020658.3-201ENST00000568093 4028 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AC245505.2-201ENST00000553572 3055 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 RGS17-201ENST00000206262 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USB1Q9BQ65 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USB1Q9BQ65 MKNK1-AS1-201ENST00000602433 2445 ntTSL 2 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
USB1Q9BQ65 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 GTF2H2B-203ENST00000508065 1432 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
USB1Q9BQ65 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
USB1Q9BQ65 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
USB1Q9BQ65 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USB1Q9BQ65 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 MARK2P4-201ENST00000503381 2380 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
USB1Q9BQ65 RNA5-8SP2-201ENST00000363564 152 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 SNORD42.2-201ENST00000365570 69 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USB1Q9BQ65 SUGT1P1-201ENST00000379514 476 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 AL162578.1-201ENST00000406202 378 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 RNU2-39P-201ENST00000410604 198 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 AC064862.3-201ENST00000411435 571 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 IPO9-AS1-202ENST00000421159 456 ntTSL 3 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 RPS27AP6-201ENST00000427962 448 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 GAPDHP19-201ENST00000431768 1005 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 RPL21P110-201ENST00000433345 446 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 AC093716.1-201ENST00000435923 377 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 RPL23AP16-201ENST00000441715 421 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 AC093799.1-201ENST00000452411 499 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 AC079080.1-201ENST00000479841 822 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 RN7SL156P-201ENST00000480334 304 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 AC098827.1-201ENST00000514630 667 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 ALG1L12P-201ENST00000515046 434 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
USB1Q9BQ65 STMN2-203ENST00000518491 585 ntTSL 2 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC7.8□□□□□ -1.16
USB1Q9BQ65 AC104117.2-201ENST00000523735 515 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 AC084337.1-201ENST00000524809 686 ntBASIC7.8□□□□□ -1.16
USB1Q9BQ65 AP002812.4-201ENST00000532139 286 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms