Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RPL7AP23-201ENST00000482625 776 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 AC092349.1-201ENST00000504903 310 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VPS50Q96JG6 AC091849.1-201ENST00000509920 121 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 AL390198.2-201ENST00000510553 222 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 HMGN1P15-201ENST00000513870 295 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 AC138517.1-201ENST00000515724 568 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 MTND1P6-201ENST00000523621 946 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 MTND5P21-201ENST00000531961 522 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 AC004232.1-201ENST00000571388 208 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 AC138207.8-204ENST00000579588 527 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 MIR4732-201ENST00000581873 76 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 BNIP3P27-201ENST00000599991 412 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 RPL12P48-201ENST00000605620 304 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 MIR6849-201ENST00000618543 69 ntBASIC6.36□□□□□ -1.39
VPS50Q96JG6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
VPS50Q96JG6 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VPS50Q96JG6 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VPS50Q96JG6 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
VPS50Q96JG6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VPS50Q96JG6 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 AC010132.4-201ENST00000569883 1368 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 AL136520.1-201ENST00000600311 1322 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS50Q96JG6 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 RBBP4P5-201ENST00000398583 1266 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 AL354692.1-201ENST00000423044 315 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 MEF2AP1-201ENST00000454867 863 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 AC099670.1-201ENST00000455141 783 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 RNU7-157P-201ENST00000459600 66 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 EIF2S2P4-201ENST00000461070 984 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 RPS7P10-201ENST00000464254 603 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 OR2A3P-201ENST00000493774 953 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 RN7SL187P-201ENST00000495587 303 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 AC010374.2-201ENST00000512933 535 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 SETP21-201ENST00000514799 892 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 RNU6-943P-201ENST00000516960 98 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 IGLV3-6-201ENST00000523937 250 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VPS50Q96JG6 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 MTND2P17-201ENST00000550281 688 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS50Q96JG6 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 AC005776.1-201ENST00000603164 290 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 AC097467.4-201ENST00000605504 141 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VPS50Q96JG6 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 AP002800.1-201ENST00000624982 2225 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS50Q96JG6 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 AC105749.1-201ENST00000631338 2008 ntBASIC6.35□□□□□ -1.39
VPS50Q96JG6 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS50Q96JG6 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.35□□□□□ -1.39
VPS50Q96JG6 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VPS50Q96JG6 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS50Q96JG6 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC022613.3-201ENST00000560740 1346 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC096992.2-201ENST00000609553 1684 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS50Q96JG6 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS50Q96JG6 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS50Q96JG6 RNA5SP321-201ENST00000362722 111 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 SNORA7A-201ENST00000384765 139 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms