Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC025857.2-201ENST00000602711 238 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC023206.1-201ENST00000605824 298 ntBASIC5.51□□□□□ -1.53
RFT1Q96AA3 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.51□□□□□ -1.53
RFT1Q96AA3 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFT1Q96AA3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFT1Q96AA3 CCNT2P1-201ENST00000423082 1315 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 AC093909.5-201ENST00000621839 1799 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFT1Q96AA3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFT1Q96AA3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFT1Q96AA3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFT1Q96AA3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFT1Q96AA3 OR7A2P-201ENST00000304105 930 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 RNA5SP140-201ENST00000364524 92 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 RNA5SP279-201ENST00000365513 117 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 RNU11-6P-201ENST00000391127 133 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 AC245036.1-201ENST00000391727 309 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 AL139100.1-201ENST00000408001 498 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFT1Q96AA3 HMGB1P32-201ENST00000425971 565 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 AL356133.1-201ENST00000444762 372 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 CCNJP1-201ENST00000450600 1149 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 RN7SL284P-201ENST00000498823 275 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 RN7SKP196-201ENST00000516267 345 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 AP002004.1-206ENST00000532441 876 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 AC089984.3-201ENST00000552838 363 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 TXNP4-201ENST00000575018 310 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 AC019257.2-201ENST00000605539 497 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 RNU6-84P-201ENST00000607737 102 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 AL137000.1-201ENST00000610528 1244 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFT1Q96AA3 RAB28P4-201ENST00000622233 665 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFT1Q96AA3 CR382285.2-201ENST00000624662 1495 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFT1Q96AA3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFT1Q96AA3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFT1Q96AA3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RFT1Q96AA3 AC020656.2-201ENST00000613291 5309 ntBASIC5.5□□□□□ -1.53
RFT1Q96AA3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RFT1Q96AA3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFT1Q96AA3 DDX18P6-201ENST00000450119 1997 ntBASIC5.49□□□□□ -1.53
RFT1Q96AA3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RFT1Q96AA3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RFT1Q96AA3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RFT1Q96AA3 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFT1Q96AA3 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RFT1Q96AA3 MIR138-2-201ENST00000384916 84 ntBASIC5.49□□□□□ -1.53
RFT1Q96AA3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFT1Q96AA3 RN7SKP205-201ENST00000410999 307 ntBASIC5.49□□□□□ -1.53
RFT1Q96AA3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFT1Q96AA3 AC092646.1-201ENST00000427142 901 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms