Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL359396.1-201ENST00000623151 2376 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 RNA5SP74-201ENST00000363538 109 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 SUGT1P1-201ENST00000379514 476 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 RPL23AP47-201ENST00000408017 460 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 RNA5SP221-201ENST00000411271 103 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AIMP1P1-201ENST00000418670 937 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC244034.1-201ENST00000428027 792 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 TRIM60P3Y-201ENST00000432201 673 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AL441963.1-201ENST00000435137 792 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 ASS1P4-201ENST00000439462 1234 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 Z99127.3-201ENST00000448158 395 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 PRELID1P3-201ENST00000450055 643 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC108463.1-201ENST00000450258 347 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 MYB-AS1-201ENST00000455534 449 ntTSL 2 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC018638.4-201ENST00000465971 1150 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC010307.1-201ENST00000467206 836 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 RN7SL77P-201ENST00000473332 294 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC109462.1-201ENST00000491087 368 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC114812.3-201ENST00000509542 730 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 SNORA20.3-201ENST00000516880 132 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC087360.1-201ENST00000518788 616 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 ATP6V1G1P2-201ENST00000522436 346 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 OR5BC1P-201ENST00000529327 739 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 DUX4L52-201ENST00000549363 777 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC120498.4-201ENST00000561649 320 ntTSL 3 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC091489.2-201ENST00000566263 604 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 CFAP52-208ENST00000576499 711 ntTSL 3 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AL158211.4-201ENST00000606988 584 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AP004247.3-201ENST00000608682 624 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC027139.2-201ENST00000615639 448 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC025287.2-201ENST00000621911 668 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 MTND1P37-201ENST00000636562 264 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 FAM157B-203ENST00000639350 358 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC025040.2-201ENST00000558657 1852 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
DEPDC4Q8N2C3 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.59□□□□□ -1.2
DEPDC4Q8N2C3 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.59□□□□□ -1.2
DEPDC4Q8N2C3 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC7.59□□□□□ -1.2
DEPDC4Q8N2C3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
DEPDC4Q8N2C3 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC7.59□□□□□ -1.2
DEPDC4Q8N2C3 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.59□□□□□ -1.2
DEPDC4Q8N2C3 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 RNU5F-6P-201ENST00000362979 116 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 RNU6-433P-201ENST00000363216 104 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 IGLV1-51-201ENST00000390290 389 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 EI24P3-201ENST00000399046 1062 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms