Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 Z68868.1-201ENST00000429048 544 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 HIGD1AP16-201ENST00000450986 258 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 RPS26P39-201ENST00000469206 341 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 RN7SL326P-201ENST00000477493 296 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 SNORA70.17-201ENST00000516449 133 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AC027667.1-201ENST00000545814 304 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AC011270.1-201ENST00000558606 583 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AC092121.1-201ENST00000569452 202 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AC005332.4-201ENST00000592752 579 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AC020915.5-201ENST00000596836 964 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AL118508.4-201ENST00000624142 1176 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 AC008627.1-201ENST00000517511 1704 ntBASIC6.86□□□□□ -1.31
HERC6Q8IVU3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HERC6Q8IVU3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 CUBNP3-201ENST00000457461 1784 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 RNU6-819P-201ENST00000364116 107 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AC083799.1-201ENST00000366451 910 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 EEF1B2P8-201ENST00000414101 671 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AC073072.2-201ENST00000447425 348 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 NDUFA5P8-201ENST00000449019 346 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 MYO5BP2-201ENST00000449815 1277 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 UBFD1P1-201ENST00000473259 814 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 RPL23AP68-201ENST00000480924 445 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AC007225.2-201ENST00000562529 256 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AC016180.1-201ENST00000567945 403 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 SNORD95-201ENST00000579879 68 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 MIR3176-201ENST00000582210 90 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.85□□□□□ -1.31
HERC6Q8IVU3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HERC6Q8IVU3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms