Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 HMGB1P7-201ENST00000450921 612 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 RN7SL326P-201ENST00000477493 296 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 OR4D12P-201ENST00000509361 911 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AC010343.2-201ENST00000510162 224 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AC026782.2-201ENST00000510845 636 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 MAST4-IT1-201ENST00000514241 658 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 HSD3BP3-201ENST00000514706 994 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 RNA5SP206-201ENST00000516703 121 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AC011853.1-201ENST00000518911 454 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AC084121.1-201ENST00000533882 835 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AL845552.1-201ENST00000556820 323 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AC002310.3-201ENST00000569728 723 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AC004232.2-201ENST00000574245 821 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 MIR4502-201ENST00000580432 81 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 AC005332.4-201ENST00000592752 579 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 MIR7159-201ENST00000620587 66 ntBASIC5.82□□□□□ -1.48
RTL4Q6ZR62 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RTL4Q6ZR62 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AC015799.1-201ENST00000622996 3122 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 U3.43-201ENST00000410734 213 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AC021876.1-201ENST00000425959 359 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 BX679664.2-201ENST00000439282 283 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AL022237.1-201ENST00000446663 358 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AC117394.1-201ENST00000477323 567 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 RPL37P23-201ENST00000492641 294 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 HMGN1P17-201ENST00000513734 295 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AL121579.2-201ENST00000555466 590 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AL359976.1-201ENST00000418655 3528 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 MSL3P1-202ENST00000440028 1468 ntBASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.81□□□□□ -1.48
RTL4Q6ZR62 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RTL4Q6ZR62 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.8□□□□□ -1.48
RTL4Q6ZR62 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
RTL4Q6ZR62 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RTL4Q6ZR62 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RTL4Q6ZR62 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.8□□□□□ -1.48
RTL4Q6ZR62 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RTL4Q6ZR62 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTL4Q6ZR62 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms