Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC38Q502W7 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC38Q502W7 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC38Q502W7 AC091133.5-201ENST00000603088 301 ntBASIC6.62□□□□□ -1.35
CCDC38Q502W7 AC024589.2-201ENST00000605642 1294 ntBASIC6.62□□□□□ -1.35
CCDC38Q502W7 AC012213.4-201ENST00000606457 354 ntBASIC6.62□□□□□ -1.35
CCDC38Q502W7 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC38Q502W7 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC38Q502W7 AC241377.1-201ENST00000619797 406 ntBASIC6.62□□□□□ -1.35
CCDC38Q502W7 AP000720.1-201ENST00000625091 483 ntBASIC6.62□□□□□ -1.35
CCDC38Q502W7 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC38Q502W7 AL161912.4-201ENST00000623889 2468 ntBASIC6.62□□□□□ -1.35
CCDC38Q502W7 AC140134.1-201ENST00000511830 3544 ntBASIC6.62□□□□□ -1.35
CCDC38Q502W7 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC38Q502W7 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC38Q502W7 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC38Q502W7 AL731532.1-201ENST00000623972 4236 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 AC092724.1-201ENST00000624623 3397 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 RPL12P23-201ENST00000405880 490 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 RN7SKP161-201ENST00000411110 305 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 RPS26P38-201ENST00000414476 348 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 AL929472.1-201ENST00000417484 429 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 E2F6P1-201ENST00000428850 745 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 AC003989.1-201ENST00000434569 565 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 AL138787.1-202ENST00000437804 898 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 E2F6P3-201ENST00000441743 743 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 GAPDHP33-201ENST00000443168 1013 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 RNU6-467P-201ENST00000517027 110 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 AC008429.2-201ENST00000523057 864 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 AC245052.7-201ENST00000601161 359 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 AL078624.2-201ENST00000605063 554 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 AL592494.3-201ENST00000609485 464 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 AC024255.1-201ENST00000614376 102 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 AC005514.1-201ENST00000623521 208 ntBASIC6.61□□□□□ -1.35
CCDC38Q502W7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC38Q502W7 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
CCDC38Q502W7 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC38Q502W7 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC38Q502W7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCDC38Q502W7 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC38Q502W7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC38Q502W7 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC38Q502W7 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CCDC38Q502W7 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.6□□□□□ -1.35
CCDC38Q502W7 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
CCDC38Q502W7 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC38Q502W7 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC38Q502W7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC38Q502W7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC38Q502W7 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC38Q502W7 OR7A2P-201ENST00000304105 930 ntBASIC6.6□□□□□ -1.35
CCDC38Q502W7 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC38Q502W7 OR56A4-201ENST00000330728 1209 ntBASIC6.6□□□□□ -1.35
CCDC38Q502W7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC38Q502W7 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC38Q502W7 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms