Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 HSPD1P9-201ENST00000420325 1636 ntBASIC6.34□□□□□ -1.39
PTPN20Q4JDL3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTPN20Q4JDL3 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.34□□□□□ -1.39
PTPN20Q4JDL3 AP003486.1-201ENST00000525716 3994 ntBASIC6.34□□□□□ -1.39
PTPN20Q4JDL3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
PTPN20Q4JDL3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTPN20Q4JDL3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTPN20Q4JDL3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 RPL23AP17-201ENST00000401064 499 ntBASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 RPL35AP3-201ENST00000414680 288 ntBASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 OR7E158P-201ENST00000524483 910 ntBASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 AL845552.1-201ENST00000556820 323 ntBASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 AP005119.1-201ENST00000580956 292 ntBASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 AC091167.5-201ENST00000605689 894 ntBASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 AC092266.1-201ENST00000610958 165 ntBASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 AP004289.1-201ENST00000436307 2205 ntBASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN20Q4JDL3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AL096800.1-201ENST00000405326 893 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 RNU4-64P-201ENST00000410795 131 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 MYL6P5-201ENST00000412707 459 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 MTND4LP17-201ENST00000414607 293 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AL365220.1-201ENST00000432923 399 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AC007679.3-201ENST00000434035 414 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 RBMY2AP-201ENST00000445405 1157 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AL445466.1-201ENST00000448432 357 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 RBMY2CP-201ENST00000448575 1157 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 RBMY2DP-202ENST00000448881 1157 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 RBMY2BP-202ENST00000451071 1156 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AC118758.1-202ENST00000454719 225 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AC104164.1-201ENST00000460282 590 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 RN7SL269P-201ENST00000467795 305 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 RNA5SP473-201ENST00000516402 125 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AC023310.2-201ENST00000553844 547 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 AC104966.1-201ENST00000467010 1464 ntBASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN20Q4JDL3 GNL2P1-201ENST00000451274 2190 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms