Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNU6-678P-201ENST00000516832 109 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AC106038.2-201ENST00000520706 568 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH1Q08174 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AC007954.1-201ENST00000554198 494 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH1Q08174 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AC134669.1-201ENST00000581275 672 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AC007136.1-201ENST00000589141 199 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 OR5AH1P-201ENST00000595968 283 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 RN7SL760P-201ENST00000607344 270 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AC093635.1-201ENST00000609028 555 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AC097505.1-201ENST00000610199 565 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 MIR7162-201ENST00000611134 69 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AC243830.3-201ENST00000616810 376 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AC233280.20-201ENST00000637412 416 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 SAMMSON-209ENST00000641222 1100 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 LINC01808-202ENST00000641680 1116 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AC009135.2-201ENST00000624136 1768 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 ZNF812P-201ENST00000457674 1694 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.21□□□□□ -1.25
PCDH1Q08174 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC7.21□□□□□ -1.25
PCDH1Q08174 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
PCDH1Q08174 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
PCDH1Q08174 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
PCDH1Q08174 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.21□□□□□ -1.25
PCDH1Q08174 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.21□□□□□ -1.25
PCDH1Q08174 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PCDH1Q08174 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PCDH1Q08174 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
PCDH1Q08174 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDH1Q08174 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDH1Q08174 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDH1Q08174 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 IL6STP1-201ENST00000346911 1020 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 RNU6-560P-201ENST00000364007 108 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AC136624.1-201ENST00000400791 413 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 KRT18P52-201ENST00000404956 846 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 RN7SKP89-201ENST00000410774 242 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AC005040.1-201ENST00000437783 482 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDH1Q08174 CYP2C56P-201ENST00000440076 291 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 FUNDC2P2-202ENST00000443452 493 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 OR52I1-201ENST00000450052 1050 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDH1Q08174 RPL21P134-201ENST00000453468 483 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AL096803.1-201ENST00000456921 1021 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 CCDC75P1-201ENST00000469247 791 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDH1Q08174 RN7SL549P-201ENST00000478997 282 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AC025459.1-201ENST00000504072 156 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDH1Q08174 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDH1Q08174 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AC026782.2-201ENST00000510845 636 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms