Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RNA5SP156-201ENST00000410250 110 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 AL359885.1-201ENST00000415786 903 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS1Q01581 KATNBL1P2-201ENST00000433311 835 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 USP24P1-201ENST00000433802 779 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 CLNS1AP1-201ENST00000435954 682 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 ZNF619P1-201ENST00000446539 752 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 RPL12P30-201ENST00000488389 499 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 AL117692.1-201ENST00000494283 713 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 AC106822.1-201ENST00000502647 526 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 AC036111.2-201ENST00000533247 901 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS1Q01581 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 AL049779.3-201ENST00000557141 606 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 AC005828.7-201ENST00000607331 556 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 RFPL4AP6-201ENST00000616792 846 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 MAPK10-350ENST00000641777 965 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 ZNF402P-201ENST00000404435 3100 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS1Q01581 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS1Q01581 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS1Q01581 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS1Q01581 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS1Q01581 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS1Q01581 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS1Q01581 OR10R3P-201ENST00000361688 942 ntBASIC5.8□□□□□ -1.48
HMGCS1Q01581 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 AL121977.1-201ENST00000401636 979 ntBASIC5.8□□□□□ -1.48
HMGCS1Q01581 RNA5SP198-201ENST00000410376 127 ntBASIC5.8□□□□□ -1.48
HMGCS1Q01581 RN7SKP166-201ENST00000410812 305 ntBASIC5.8□□□□□ -1.48
HMGCS1Q01581 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 CUBNP2-201ENST00000443534 1139 ntBASIC5.8□□□□□ -1.48
HMGCS1Q01581 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS1Q01581 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 RN7SL552P-201ENST00000462094 276 ntBASIC5.8□□□□□ -1.48
HMGCS1Q01581 AC005017.1-201ENST00000482002 490 ntBASIC5.8□□□□□ -1.48
HMGCS1Q01581 TOMM22P4-201ENST00000511318 336 ntBASIC5.8□□□□□ -1.48
HMGCS1Q01581 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.8□□□□□ -1.48
HMGCS1Q01581 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS1Q01581 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS1Q01581 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS1Q01581 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS1Q01581 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS1Q01581 OFD1P17-201ENST00000437639 3018 ntBASIC5.8□□□□□ -1.48
HMGCS1Q01581 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HMGCS1Q01581 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS1Q01581 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS1Q01581 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS1Q01581 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS1Q01581 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS1Q01581 RNA5SP110-201ENST00000362638 115 ntBASIC5.79□□□□□ -1.48
HMGCS1Q01581 AL139805.1-201ENST00000407837 289 ntBASIC5.79□□□□□ -1.48
HMGCS1Q01581 RN7SKP108-201ENST00000411367 328 ntBASIC5.79□□□□□ -1.48
HMGCS1Q01581 RPS7P8-201ENST00000418311 581 ntBASIC5.79□□□□□ -1.48
HMGCS1Q01581 AC099782.1-201ENST00000425889 474 ntBASIC5.79□□□□□ -1.48
HMGCS1Q01581 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms