Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCNA1P78396 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.02□□□□□ -1.29
CCNA1P78396 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.02□□□□□ -1.29
CCNA1P78396 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.02□□□□□ -1.29
CCNA1P78396 SNORD95-201ENST00000579879 68 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 AC012254.3-201ENST00000591183 2117 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 AC119501.1-201ENST00000603646 475 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 AL512624.1-201ENST00000613638 469 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 FO082842.1-201ENST00000423552 1370 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CCNA1P78396 AC006600.2-201ENST00000624834 2506 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCNA1P78396 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CCNA1P78396 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CCNA1P78396 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCNA1P78396 OR13C1P-202ENST00000641378 2919 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCNA1P78396 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCNA1P78396 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CCNA1P78396 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.02□□□□□ -1.29
CCNA1P78396 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CCNA1P78396 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
CCNA1P78396 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
CCNA1P78396 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CCNA1P78396 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCNA1P78396 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
CCNA1P78396 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCNA1P78396 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCNA1P78396 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.01□□□□□ -1.29
CCNA1P78396 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.01□□□□□ -1.29
CCNA1P78396 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.01□□□□□ -1.29
CCNA1P78396 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
CCNA1P78396 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.01□□□□□ -1.29
CCNA1P78396 GEMIN2P1-201ENST00000454246 752 ntBASIC7.01□□□□□ -1.29
CCNA1P78396 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.01□□□□□ -1.29
CCNA1P78396 AC114728.1-201ENST00000488289 483 ntBASIC7.01□□□□□ -1.29
CCNA1P78396 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.01□□□□□ -1.29
CCNA1P78396 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.01□□□□□ -1.29
CCNA1P78396 IGHV1-14-201ENST00000523391 241 ntBASIC7.01□□□□□ -1.29
CCNA1P78396 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.01□□□□□ -1.29
CCNA1P78396 RPA2P3-201ENST00000533268 770 ntBASIC7.01□□□□□ -1.29
CCNA1P78396 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.01□□□□□ -1.29
CCNA1P78396 AP001496.3-201ENST00000580230 913 ntBASIC7.01□□□□□ -1.29
CCNA1P78396 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.01□□□□□ -1.29
CCNA1P78396 AC013731.1-201ENST00000604340 883 ntBASIC7.01□□□□□ -1.29
CCNA1P78396 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.01□□□□□ -1.29
CCNA1P78396 AL049840.6-201ENST00000604583 345 ntBASIC7.01□□□□□ -1.29
CCNA1P78396 AC018690.1-201ENST00000608144 626 ntBASIC7.01□□□□□ -1.29
CCNA1P78396 AC096861.1-201ENST00000616652 240 ntBASIC7.01□□□□□ -1.29
CCNA1P78396 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.01□□□□□ -1.29
CCNA1P78396 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.01□□□□□ -1.29
CCNA1P78396 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CCNA1P78396 MAPK10-287ENST00000641217 3037 ntBASIC7.01□□□□□ -1.29
CCNA1P78396 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.01□□□□□ -1.29
CCNA1P78396 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CCNA1P78396 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCNA1P78396 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CCNA1P78396 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CCNA1P78396 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCNA1P78396 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7□□□□□ -1.29
CCNA1P78396 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 MROH3P-201ENST00000435735 2676 ntBASIC7□□□□□ -1.29
CCNA1P78396 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
CCNA1P78396 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7□□□□□ -1.29
CCNA1P78396 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7□□□□□ -1.29
CCNA1P78396 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 OR11H13P-201ENST00000359695 979 ntBASIC7□□□□□ -1.29
CCNA1P78396 MIR375-201ENST00000362103 64 ntBASIC7□□□□□ -1.29
CCNA1P78396 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 MIR433-201ENST00000384837 93 ntBASIC7□□□□□ -1.29
CCNA1P78396 OR7E101P-201ENST00000400428 513 ntBASIC7□□□□□ -1.29
CCNA1P78396 GTF3AP1-201ENST00000416942 1004 ntBASIC7□□□□□ -1.29
CCNA1P78396 BX323845.3-201ENST00000428215 527 ntBASIC7□□□□□ -1.29
CCNA1P78396 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7□□□□□ -1.29
CCNA1P78396 RN7SL629P-201ENST00000489622 285 ntBASIC7□□□□□ -1.29
CCNA1P78396 SUMO2P7-201ENST00000511179 285 ntBASIC7□□□□□ -1.29
CCNA1P78396 RNA5SP400-201ENST00000517155 111 ntBASIC7□□□□□ -1.29
CCNA1P78396 CYCSP22-201ENST00000517555 339 ntBASIC7□□□□□ -1.29
CCNA1P78396 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7□□□□□ -1.29
CCNA1P78396 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7□□□□□ -1.29
CCNA1P78396 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7□□□□□ -1.29
CCNA1P78396 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7□□□□□ -1.29
CCNA1P78396 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7□□□□□ -1.29
CCNA1P78396 AC022404.1-201ENST00000555320 273 ntBASIC7□□□□□ -1.29
CCNA1P78396 AC093524.1-201ENST00000564266 1094 ntBASIC7□□□□□ -1.29
CCNA1P78396 MIR3176-201ENST00000582210 90 ntBASIC7□□□□□ -1.29
CCNA1P78396 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 AP005431.1-201ENST00000618479 319 ntBASIC7□□□□□ -1.29
CCNA1P78396 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7□□□□□ -1.29
CCNA1P78396 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7□□□□□ -1.29
CCNA1P78396 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7□□□□□ -1.29
CCNA1P78396 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7□□□□□ -1.29
CCNA1P78396 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7□□□□□ -1.29
CCNA1P78396 CDY3P-201ENST00000454543 1618 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms