Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN6P56747 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN6P56747 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN6P56747 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
CLDN6P56747 AC009779.8-201ENST00000641684 4384 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.94□□□□□ -1.46
CLDN6P56747 CDY5P-201ENST00000411487 1580 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 CDY9P-201ENST00000451397 1580 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN6P56747 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN6P56747 AC106872.5-201ENST00000508856 1416 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN6P56747 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN6P56747 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CLDN6P56747 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN6P56747 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 AC096537.2-201ENST00000413707 714 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.94□□□□□ -1.46
CLDN6P56747 DEFA9P-201ENST00000433042 285 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 PPIAP10-201ENST00000438675 458 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 ZNF619P1-201ENST00000446539 752 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 MYO5BP2-201ENST00000449815 1277 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.94□□□□□ -1.46
CLDN6P56747 RPSAP37-201ENST00000470913 821 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 AC083906.1-201ENST00000509298 406 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 AC073581.1-201ENST00000519036 575 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.94□□□□□ -1.46
CLDN6P56747 AC079600.1-201ENST00000550326 297 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN6P56747 ZNF322P1-201ENST00000568013 1209 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.94□□□□□ -1.46
CLDN6P56747 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.94□□□□□ -1.46
CLDN6P56747 AC090236.2-201ENST00000587933 1101 ntBASIC5.94□□□□□ -1.46
CLDN6P56747 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN6P56747 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN6P56747 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN6P56747 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN6P56747 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CLDN6P56747 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.93□□□□□ -1.46
CLDN6P56747 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
CLDN6P56747 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CLDN6P56747 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.93□□□□□ -1.46
CLDN6P56747 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CLDN6P56747 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.93□□□□□ -1.46
CLDN6P56747 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 AC009120.2-204ENST00000621548 2032 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.93□□□□□ -1.46
CLDN6P56747 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 OR2M1P-201ENST00000318104 951 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 SNORA58B-201ENST00000364259 136 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.93□□□□□ -1.46
CLDN6P56747 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.93□□□□□ -1.46
CLDN6P56747 SUMO2P1-206ENST00000445436 284 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.93□□□□□ -1.46
CLDN6P56747 SBDSP1-204ENST00000453858 737 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 AC006539.1-201ENST00000481419 501 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.93□□□□□ -1.46
CLDN6P56747 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.93□□□□□ -1.46
CLDN6P56747 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.93□□□□□ -1.46
CLDN6P56747 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.93□□□□□ -1.46
CLDN6P56747 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.93□□□□□ -1.46
CLDN6P56747 AP004607.6-201ENST00000525033 1202 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.93□□□□□ -1.46
CLDN6P56747 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.93□□□□□ -1.46
CLDN6P56747 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.93□□□□□ -1.46
CLDN6P56747 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 SETP3-201ENST00000581726 813 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 BNIP3P32-201ENST00000600015 554 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 AL683813.2-201ENST00000605245 502 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.93□□□□□ -1.46
CLDN6P56747 MIR6793-201ENST00000612376 63 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 MIR7159-201ENST00000620587 66 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.93□□□□□ -1.46
CLDN6P56747 Z83820.1-201ENST00000456978 1499 ntBASIC5.93□□□□□ -1.46
CLDN6P56747 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN6P56747 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.93□□□□□ -1.46
CLDN6P56747 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms