Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 CUBNP2-201ENST00000443534 1139 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.91□□□□□ -1.46
PKNOX1P55347 AC009963.4-201ENST00000448535 339 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 AC022730.1-201ENST00000473114 568 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.91□□□□□ -1.46
PKNOX1P55347 MTCO1P55-201ENST00000489829 745 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 AC018639.1-201ENST00000492994 442 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 CCDC11P1-201ENST00000503137 1162 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.91□□□□□ -1.46
PKNOX1P55347 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.91□□□□□ -1.46
PKNOX1P55347 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.91□□□□□ -1.46
PKNOX1P55347 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.91□□□□□ -1.46
PKNOX1P55347 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.91□□□□□ -1.46
PKNOX1P55347 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.91□□□□□ -1.46
PKNOX1P55347 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.91□□□□□ -1.46
PKNOX1P55347 AC119403.2-201ENST00000590960 598 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 AP001823.1-201ENST00000604056 1003 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.91□□□□□ -1.46
PKNOX1P55347 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.91□□□□□ -1.46
PKNOX1P55347 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.91□□□□□ -1.46
PKNOX1P55347 AC007204.1-201ENST00000621794 555 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.91□□□□□ -1.46
PKNOX1P55347 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.91□□□□□ -1.46
PKNOX1P55347 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.91□□□□□ -1.46
PKNOX1P55347 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.91□□□□□ -1.46
PKNOX1P55347 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
PKNOX1P55347 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.91□□□□□ -1.46
PKNOX1P55347 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PKNOX1P55347 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PKNOX1P55347 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.9□□□□□ -1.46
PKNOX1P55347 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.9□□□□□ -1.46
PKNOX1P55347 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PKNOX1P55347 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PKNOX1P55347 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
PKNOX1P55347 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PKNOX1P55347 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PKNOX1P55347 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
PKNOX1P55347 RPL11P4-201ENST00000332269 436 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 RNA5SP375-201ENST00000362975 119 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 RNU105B-201ENST00000364478 208 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.9□□□□□ -1.46
PKNOX1P55347 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PKNOX1P55347 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
PKNOX1P55347 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PKNOX1P55347 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
PKNOX1P55347 PRELID1P1-201ENST00000403549 660 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 MYL6P5-201ENST00000412707 459 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.9□□□□□ -1.46
PKNOX1P55347 AL354868.1-201ENST00000417077 482 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 MTND2P12-201ENST00000417560 1252 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 RPS15AP30-201ENST00000420976 390 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.9□□□□□ -1.46
PKNOX1P55347 AL512593.1-201ENST00000444758 779 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PKNOX1P55347 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.9□□□□□ -1.46
PKNOX1P55347 AC093719.1-201ENST00000480427 441 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 RPL34P33-201ENST00000486062 334 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.9□□□□□ -1.46
PKNOX1P55347 RN7SL284P-201ENST00000498823 275 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.9□□□□□ -1.46
PKNOX1P55347 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.9□□□□□ -1.46
PKNOX1P55347 ST13P12-201ENST00000508958 1094 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.9□□□□□ -1.46
PKNOX1P55347 RNA5SP96-201ENST00000516041 107 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 SNORA74.1-201ENST00000516320 180 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 RNA5SP434-201ENST00000516647 121 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.9□□□□□ -1.46
PKNOX1P55347 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.9□□□□□ -1.46
PKNOX1P55347 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.9□□□□□ -1.46
PKNOX1P55347 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.9□□□□□ -1.46
PKNOX1P55347 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.9□□□□□ -1.46
PKNOX1P55347 SETP3-201ENST00000581726 813 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.9□□□□□ -1.46
PKNOX1P55347 MIR212-201ENST00000586026 110 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.9□□□□□ -1.46
PKNOX1P55347 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.9□□□□□ -1.46
PKNOX1P55347 GAPDHP41-201ENST00000613707 975 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.9□□□□□ -1.46
PKNOX1P55347 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.9□□□□□ -1.46
PKNOX1P55347 THAP12P9-201ENST00000503971 2360 ntBASIC5.9□□□□□ -1.46
PKNOX1P55347 CASC19-260ENST00000641828 2001 ntBASIC5.9□□□□□ -1.47
PKNOX1P55347 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PKNOX1P55347 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
PKNOX1P55347 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PKNOX1P55347 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.9□□□□□ -1.47
PKNOX1P55347 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PKNOX1P55347 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PKNOX1P55347 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.9□□□□□ -1.47
PKNOX1P55347 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
PKNOX1P55347 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PKNOX1P55347 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
PKNOX1P55347 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.89□□□□□ -1.47
PKNOX1P55347 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PKNOX1P55347 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PKNOX1P55347 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.89□□□□□ -1.47
PKNOX1P55347 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms