Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 OR4H6P-202ENST00000603819 340 ntBASIC5.82□□□□□ -1.48
CDH12P55289 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH12P55289 AC003992.1-201ENST00000635364 557 ntBASIC5.82□□□□□ -1.48
CDH12P55289 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 MAPK10-261ENST00000641050 3109 ntBASIC5.82□□□□□ -1.48
CDH12P55289 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDH12P55289 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
CDH12P55289 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH12P55289 AL591135.1-201ENST00000401578 5914 ntBASIC5.81□□□□□ -1.48
CDH12P55289 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH12P55289 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH12P55289 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CDH12P55289 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH12P55289 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 SNORD16-201ENST00000362803 99 ntBASIC5.81□□□□□ -1.48
CDH12P55289 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.81□□□□□ -1.48
CDH12P55289 GNG5P2-201ENST00000372054 207 ntBASIC5.81□□□□□ -1.48
CDH12P55289 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 RPL7P58-201ENST00000402913 758 ntBASIC5.81□□□□□ -1.48
CDH12P55289 AL589994.1-201ENST00000404962 340 ntBASIC5.81□□□□□ -1.48
CDH12P55289 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH12P55289 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH12P55289 RN7SKP129-201ENST00000410288 299 ntBASIC5.81□□□□□ -1.48
CDH12P55289 RNA5SP231-201ENST00000410496 138 ntBASIC5.81□□□□□ -1.48
CDH12P55289 RNA5SP155-201ENST00000411154 129 ntBASIC5.81□□□□□ -1.48
CDH12P55289 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH12P55289 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH12P55289 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH12P55289 HMGN1P32-201ENST00000441744 256 ntBASIC5.81□□□□□ -1.48
CDH12P55289 GXYLT1P1-201ENST00000446657 490 ntBASIC5.81□□□□□ -1.48
CDH12P55289 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH12P55289 RPL5P33-201ENST00000487833 905 ntBASIC5.81□□□□□ -1.48
CDH12P55289 OR2A3P-201ENST00000493774 953 ntBASIC5.81□□□□□ -1.48
CDH12P55289 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH12P55289 RNU6-760P-201ENST00000516078 97 ntBASIC5.81□□□□□ -1.48
CDH12P55289 RNU6-943P-201ENST00000516960 98 ntBASIC5.81□□□□□ -1.48
CDH12P55289 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDH12P55289 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH12P55289 CHEK2P2-201ENST00000554701 672 ntBASIC5.81□□□□□ -1.48
CDH12P55289 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH12P55289 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH12P55289 GLYATL1P2-202ENST00000588046 902 ntBASIC5.81□□□□□ -1.48
CDH12P55289 VN1R81P-201ENST00000602085 372 ntBASIC5.81□□□□□ -1.48
CDH12P55289 AC011458.1-201ENST00000604034 617 ntBASIC5.81□□□□□ -1.48
CDH12P55289 AC073046.2-201ENST00000604756 527 ntBASIC5.81□□□□□ -1.48
CDH12P55289 AP001002.2-201ENST00000625137 386 ntBASIC5.81□□□□□ -1.48
CDH12P55289 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 OFD1P17-201ENST00000437639 3018 ntBASIC5.81□□□□□ -1.48
CDH12P55289 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.81□□□□□ -1.48
CDH12P55289 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH12P55289 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDH12P55289 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH12P55289 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH12P55289 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH12P55289 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH12P55289 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CDH12P55289 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH12P55289 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH12P55289 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
CDH12P55289 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CDH12P55289 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDH12P55289 RNU6-618P-201ENST00000363518 112 ntBASIC5.8□□□□□ -1.48
CDH12P55289 RNU1-84P-201ENST00000365447 164 ntBASIC5.8□□□□□ -1.48
CDH12P55289 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH12P55289 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH12P55289 GTF3AP1-201ENST00000416942 1004 ntBASIC5.8□□□□□ -1.48
CDH12P55289 AC015977.1-201ENST00000418887 292 ntBASIC5.8□□□□□ -1.48
CDH12P55289 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH12P55289 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH12P55289 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH12P55289 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH12P55289 AC073072.2-201ENST00000447425 348 ntBASIC5.8□□□□□ -1.48
CDH12P55289 AL035690.1-201ENST00000490892 383 ntBASIC5.8□□□□□ -1.48
CDH12P55289 AC025768.1-201ENST00000510057 267 ntBASIC5.8□□□□□ -1.48
CDH12P55289 OR51A1P-201ENST00000511110 946 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms