Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.05□□□□□ -1.28
EPHB3P54753 RN7SL199P-201ENST00000578752 281 ntBASIC7.05□□□□□ -1.28
EPHB3P54753 RN7SL656P-201ENST00000579044 281 ntBASIC7.05□□□□□ -1.28
EPHB3P54753 RN7SL404P-201ENST00000582421 281 ntBASIC7.05□□□□□ -1.28
EPHB3P54753 NPM1P45-201ENST00000583151 559 ntBASIC7.05□□□□□ -1.28
EPHB3P54753 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.05□□□□□ -1.28
EPHB3P54753 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.05□□□□□ -1.28
EPHB3P54753 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.05□□□□□ -1.28
EPHB3P54753 SNORD91A-202ENST00000609620 191 ntBASIC7.05□□□□□ -1.28
EPHB3P54753 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.05□□□□□ -1.28
EPHB3P54753 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC7.05□□□□□ -1.28
EPHB3P54753 AC245389.2-201ENST00000616023 576 ntBASIC7.05□□□□□ -1.28
EPHB3P54753 AC006338.2-201ENST00000616864 791 ntBASIC7.05□□□□□ -1.28
EPHB3P54753 AC242843.1-201ENST00000618702 573 ntBASIC7.05□□□□□ -1.28
EPHB3P54753 RPSAP68-201ENST00000625020 438 ntBASIC7.05□□□□□ -1.28
EPHB3P54753 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.05□□□□□ -1.28
EPHB3P54753 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.05□□□□□ -1.28
EPHB3P54753 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
EPHB3P54753 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
EPHB3P54753 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
EPHB3P54753 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.05□□□□□ -1.28
EPHB3P54753 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.05□□□□□ -1.28
EPHB3P54753 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
EPHB3P54753 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.05□□□□□ -1.28
EPHB3P54753 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.05□□□□□ -1.28
EPHB3P54753 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.05□□□□□ -1.28
EPHB3P54753 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.05□□□□□ -1.28
EPHB3P54753 AL023806.3-201ENST00000638502 2704 ntBASIC7.05□□□□□ -1.28
EPHB3P54753 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
EPHB3P54753 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
EPHB3P54753 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.05□□□□□ -1.28
EPHB3P54753 Z97989.1-201ENST00000531702 2421 ntBASIC7.05□□□□□ -1.28
EPHB3P54753 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
EPHB3P54753 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.04□□□□□ -1.28
EPHB3P54753 AC122713.2-201ENST00000624942 3335 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.04□□□□□ -1.28
EPHB3P54753 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
EPHB3P54753 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.04□□□□□ -1.28
EPHB3P54753 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
EPHB3P54753 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
EPHB3P54753 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.04□□□□□ -1.28
EPHB3P54753 Y_RNA.169-201ENST00000363745 96 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 RNA5SP485-201ENST00000365053 119 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 U3.52-201ENST00000384034 216 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
EPHB3P54753 VN1R12P-201ENST00000403778 876 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
EPHB3P54753 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC7.04□□□□□ -1.28
EPHB3P54753 QRSL1P2-201ENST00000418582 964 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 MFSD13B-201ENST00000420133 1290 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC7.04□□□□□ -1.28
EPHB3P54753 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.04□□□□□ -1.28
EPHB3P54753 BX119917.1-201ENST00000432517 502 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.04□□□□□ -1.28
EPHB3P54753 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC7.04□□□□□ -1.28
EPHB3P54753 VN1R25P-201ENST00000443385 738 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC7.04□□□□□ -1.28
EPHB3P54753 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC7.04□□□□□ -1.28
EPHB3P54753 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC7.04□□□□□ -1.28
EPHB3P54753 MARK2P8-201ENST00000476069 952 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 AC126121.1-201ENST00000482313 553 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
EPHB3P54753 RN7SL569P-201ENST00000494652 288 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 PABPC1P1-201ENST00000506347 591 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 AC010625.1-201ENST00000511296 403 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 AC093664.1-201ENST00000511779 289 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 OR5BM1P-201ENST00000512021 366 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC7.04□□□□□ -1.28
EPHB3P54753 OSBPL9P3-201ENST00000534523 595 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.04□□□□□ -1.28
EPHB3P54753 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC7.04□□□□□ -1.28
EPHB3P54753 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
EPHB3P54753 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.04□□□□□ -1.28
EPHB3P54753 AC095055.1-201ENST00000603472 1113 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC7.04□□□□□ -1.28
EPHB3P54753 SNORA35B-201ENST00000607417 129 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 AC084036.1-201ENST00000609190 508 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 AC124016.2-201ENST00000610058 665 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 AL589743.6-201ENST00000611025 117 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.04□□□□□ -1.28
EPHB3P54753 BX649567.1-201ENST00000642071 1134 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 AC022507.1-201ENST00000548349 1505 ntBASIC7.04□□□□□ -1.28
EPHB3P54753 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.04□□□□□ -1.28
EPHB3P54753 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.04□□□□□ -1.28
EPHB3P54753 AL136981.1-203ENST00000451452 3844 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms