Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC7.54□□□□□ -1.2
MRE11P49959 AC106785.4-201ENST00000569492 412 ntBASIC7.54□□□□□ -1.2
MRE11P49959 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
MRE11P49959 MIR4312-201ENST00000579909 76 ntBASIC7.54□□□□□ -1.2
MRE11P49959 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.54□□□□□ -1.2
MRE11P49959 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.54□□□□□ -1.2
MRE11P49959 AC007255.2-201ENST00000604053 631 ntBASIC7.54□□□□□ -1.2
MRE11P49959 AL136295.6-201ENST00000610486 658 ntBASIC7.54□□□□□ -1.2
MRE11P49959 AC104763.3-201ENST00000613765 618 ntBASIC7.54□□□□□ -1.2
MRE11P49959 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
MRE11P49959 MIR6503-201ENST00000622884 86 ntBASIC7.54□□□□□ -1.2
MRE11P49959 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.54□□□□□ -1.2
MRE11P49959 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
MRE11P49959 MAPK10-350ENST00000641777 965 ntBASIC7.54□□□□□ -1.2
MRE11P49959 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
MRE11P49959 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.54□□□□□ -1.2
MRE11P49959 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.54□□□□□ -1.2
MRE11P49959 OR2A3P-202ENST00000641249 1776 ntBASIC7.54□□□□□ -1.2
MRE11P49959 NEK2P2-201ENST00000438441 1338 ntBASIC7.53□□□□□ -1.2
MRE11P49959 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC7.53□□□□□ -1.2
MRE11P49959 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.53□□□□□ -1.2
MRE11P49959 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.53□□□□□ -1.2
MRE11P49959 RNA5SP433-201ENST00000364491 114 ntBASIC7.53□□□□□ -1.2
MRE11P49959 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
MRE11P49959 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
MRE11P49959 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 MT-RNR1-201ENST00000389680 954 ntBASIC7.53□□□□□ -1.2
MRE11P49959 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.53□□□□□ -1.2
MRE11P49959 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.53□□□□□ -1.2
MRE11P49959 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.53□□□□□ -1.2
MRE11P49959 AC239367.3-201ENST00000428996 814 ntBASIC7.53□□□□□ -1.2
MRE11P49959 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.53□□□□□ -1.2
MRE11P49959 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.53□□□□□ -1.2
MRE11P49959 SETP20-201ENST00000457046 852 ntBASIC7.53□□□□□ -1.2
MRE11P49959 SNRPCP3-201ENST00000474888 476 ntBASIC7.53□□□□□ -1.2
MRE11P49959 RN7SL177P-201ENST00000476596 299 ntBASIC7.53□□□□□ -1.2
MRE11P49959 AP002884.1-201ENST00000479691 655 ntBASIC7.53□□□□□ -1.2
MRE11P49959 AC015524.1-201ENST00000491585 472 ntBASIC7.53□□□□□ -1.2
MRE11P49959 RN7SL187P-201ENST00000495587 303 ntBASIC7.53□□□□□ -1.2
MRE11P49959 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.53□□□□□ -1.2
MRE11P49959 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 CARSP2-201ENST00000520688 277 ntBASIC7.53□□□□□ -1.2
MRE11P49959 AP003102.1-201ENST00000525638 661 ntBASIC7.53□□□□□ -1.2
MRE11P49959 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
MRE11P49959 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 AP000919.1-201ENST00000582850 985 ntBASIC7.53□□□□□ -1.2
MRE11P49959 WDR45BP1-201ENST00000583470 1029 ntBASIC7.53□□□□□ -1.2
MRE11P49959 AL157899.1-201ENST00000604110 936 ntBASIC7.53□□□□□ -1.2
MRE11P49959 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.53□□□□□ -1.2
MRE11P49959 GAPDHP41-201ENST00000613707 975 ntBASIC7.53□□□□□ -1.2
MRE11P49959 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.53□□□□□ -1.2
MRE11P49959 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.53□□□□□ -1.2
MRE11P49959 AC016957.2-201ENST00000616998 848 ntBASIC7.53□□□□□ -1.2
MRE11P49959 WBP1LP8-201ENST00000617401 327 ntBASIC7.53□□□□□ -1.2
MRE11P49959 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.53□□□□□ -1.2
MRE11P49959 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MRE11P49959 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
MRE11P49959 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
MRE11P49959 RARSP1-201ENST00000542842 1418 ntBASIC7.52□□□□□ -1.2
MRE11P49959 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.52□□□□□ -1.21
MRE11P49959 AP002512.4-202ENST00000641599 4530 ntBASIC7.52□□□□□ -1.21
MRE11P49959 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.52□□□□□ -1.21
MRE11P49959 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.52□□□□□ -1.21
MRE11P49959 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.52□□□□□ -1.21
MRE11P49959 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.52□□□□□ -1.21
MRE11P49959 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.52□□□□□ -1.21
MRE11P49959 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.52□□□□□ -1.21
MRE11P49959 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
MRE11P49959 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
MRE11P49959 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC7.52□□□□□ -1.21
MRE11P49959 SNORA64.3-201ENST00000365647 134 ntBASIC7.52□□□□□ -1.21
MRE11P49959 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
MRE11P49959 PTPN2P1-201ENST00000423212 1072 ntBASIC7.52□□□□□ -1.21
MRE11P49959 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
MRE11P49959 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 UBE2V1P6-201ENST00000430840 422 ntBASIC7.52□□□□□ -1.21
MRE11P49959 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC7.52□□□□□ -1.21
MRE11P49959 AL391987.1-201ENST00000441025 200 ntBASIC7.52□□□□□ -1.21
MRE11P49959 RNF2P1-201ENST00000442955 1010 ntBASIC7.52□□□□□ -1.21
MRE11P49959 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
MRE11P49959 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC7.52□□□□□ -1.21
MRE11P49959 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC7.52□□□□□ -1.21
MRE11P49959 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 AP003084.1-201ENST00000524828 742 ntBASIC7.52□□□□□ -1.21
MRE11P49959 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC7.52□□□□□ -1.21
MRE11P49959 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms