Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 HSFY1P1-201ENST00000423928 1178 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 HSPE1P16-201ENST00000426640 348 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA1P49639 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA1P49639 AC096632.2-201ENST00000438139 1239 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA1P49639 AC010240.2-201ENST00000445363 1205 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 CCNJP2-201ENST00000457810 1163 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA1P49639 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA1P49639 RN7SL390P-201ENST00000470634 284 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 AC092824.1-201ENST00000483524 576 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA1P49639 AC091965.3-201ENST00000506236 208 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA1P49639 RNU6-513P-201ENST00000516104 104 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 RNA5SP318-201ENST00000516352 92 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 SNORA26.10-201ENST00000516427 141 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 HNRNPCP8-201ENST00000528764 888 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA1P49639 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA1P49639 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA1P49639 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA1P49639 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXA1P49639 AC006120.1-201ENST00000579375 546 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA1P49639 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA1P49639 AC096586.2-201ENST00000610260 441 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 AC009032.1-201ENST00000617574 431 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 AC005277.2-201ENST00000617898 390 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 AL359742.1-201ENST00000622497 540 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA1P49639 MIR665-201ENST00000635949 72 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 AL590396.2-201ENST00000636511 1041 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA1P49639 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA1P49639 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA1P49639 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA1P49639 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA1P49639 AC027279.4-201ENST00000624371 2072 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HOXA1P49639 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA1P49639 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA1P49639 AL137141.1-201ENST00000624622 4836 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA1P49639 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA1P49639 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA1P49639 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA1P49639 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA1P49639 AC068446.1-201ENST00000556425 1549 ntBASIC5.28□□□□□ -1.56
HOXA1P49639 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA1P49639 THAP12P8-201ENST00000447914 2115 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA1P49639 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXA1P49639 TCP1P3-201ENST00000414406 1498 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 AC002525.1-201ENST00000624392 1622 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA1P49639 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA1P49639 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA1P49639 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA1P49639 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HOXA1P49639 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HOXA1P49639 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA1P49639 RN7SKP189-201ENST00000365042 330 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA1P49639 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA1P49639 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA1P49639 AL121977.1-201ENST00000401636 979 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 AL589655.1-201ENST00000405398 482 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 AL139039.2-201ENST00000407436 479 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXA1P49639 RNU2-5P-201ENST00000410533 180 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 SEC63P1-201ENST00000425785 1258 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
HOXA1P49639 AC097721.1-201ENST00000427150 1253 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA1P49639 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.27□□□□□ -1.57
HOXA1P49639 PHBP4-201ENST00000437447 837 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 AC083855.1-201ENST00000440041 258 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 AC027124.1-201ENST00000440852 466 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXA1P49639 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXA1P49639 AL139135.2-201ENST00000445040 433 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA1P49639 VN1R48P-201ENST00000448149 1036 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXA1P49639 SLAMF6P1-201ENST00000451067 602 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 AC005517.1-201ENST00000452091 489 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
HOXA1P49639 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXA1P49639 OR2A3P-201ENST00000493774 953 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXA1P49639 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA1P49639 CAB39P1-201ENST00000502277 460 ntBASIC5.27□□□□□ -1.57
HOXA1P49639 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXA1P49639 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA1P49639 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXA1P49639 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms