Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CNGA1P29973 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.49□□□□□ -1.21
CNGA1P29973 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.49□□□□□ -1.21
CNGA1P29973 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CNGA1P29973 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CNGA1P29973 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.49□□□□□ -1.21
CNGA1P29973 OLMALINC-203ENST00000641087 3779 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.48□□□□□ -1.21
CNGA1P29973 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CNGA1P29973 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.48□□□□□ -1.21
CNGA1P29973 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CNGA1P29973 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CNGA1P29973 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CNGA1P29973 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CNGA1P29973 SNORA70.3-201ENST00000365075 132 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CNGA1P29973 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.48□□□□□ -1.21
CNGA1P29973 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.48□□□□□ -1.21
CNGA1P29973 ELOCP6-201ENST00000429066 328 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 MTND2P21-201ENST00000436242 1042 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.48□□□□□ -1.21
CNGA1P29973 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC7.48□□□□□ -1.21
CNGA1P29973 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.48□□□□□ -1.21
CNGA1P29973 CCRL1P1-201ENST00000449542 1053 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 AC009963.3-201ENST00000458090 486 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 ELOCP12-201ENST00000458706 328 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 RPL7P51-201ENST00000490532 749 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 AP002453.1-201ENST00000492327 668 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 RPL5P11-201ENST00000498068 893 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 AC018645.1-201ENST00000505003 109 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.48□□□□□ -1.21
CNGA1P29973 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.48□□□□□ -1.21
CNGA1P29973 SETP21-201ENST00000514799 892 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 RNU6-1102P-201ENST00000516149 96 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 SNORA81.2-201ENST00000516868 170 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 SNORA76.2-201ENST00000517095 137 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CNGA1P29973 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.48□□□□□ -1.21
CNGA1P29973 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CNGA1P29973 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.48□□□□□ -1.21
CNGA1P29973 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.48□□□□□ -1.21
CNGA1P29973 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.48□□□□□ -1.21
CNGA1P29973 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.48□□□□□ -1.21
CNGA1P29973 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
CNGA1P29973 AC026898.1-201ENST00000586404 571 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 AL513218.1-201ENST00000606527 391 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC7.48□□□□□ -1.21
CNGA1P29973 AC018645.2-201ENST00000609151 472 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 AC097460.3-201ENST00000623099 442 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 AC073488.6-201ENST00000632293 754 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.48□□□□□ -1.21
CNGA1P29973 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
CNGA1P29973 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CNGA1P29973 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CNGA1P29973 WBP11P1-201ENST00000562560 1931 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.48□□□□□ -1.21
CNGA1P29973 AP005139.1-201ENST00000580702 1647 ntBASIC7.48□□□□□ -1.21
CNGA1P29973 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CNGA1P29973 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CNGA1P29973 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CNGA1P29973 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CNGA1P29973 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.48□□□□□ -1.21
CNGA1P29973 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CNGA1P29973 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CNGA1P29973 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CNGA1P29973 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CNGA1P29973 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.47□□□□□ -1.21
CNGA1P29973 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CNGA1P29973 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.47□□□□□ -1.21
CNGA1P29973 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CNGA1P29973 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CNGA1P29973 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.47□□□□□ -1.21
CNGA1P29973 AC009135.2-201ENST00000624136 1768 ntBASIC7.47□□□□□ -1.21
CNGA1P29973 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.47□□□□□ -1.21
CNGA1P29973 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.47□□□□□ -1.21
CNGA1P29973 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CNGA1P29973 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CNGA1P29973 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
CNGA1P29973 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CNGA1P29973 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CNGA1P29973 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC7.47□□□□□ -1.21
CNGA1P29973 AL354692.1-201ENST00000423044 315 ntBASIC7.47□□□□□ -1.21
CNGA1P29973 MORF4L1P7-201ENST00000426038 703 ntBASIC7.47□□□□□ -1.21
CNGA1P29973 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.47□□□□□ -1.21
CNGA1P29973 ELOCP3-201ENST00000439303 348 ntBASIC7.47□□□□□ -1.21
CNGA1P29973 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CNGA1P29973 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.47□□□□□ -1.21
CNGA1P29973 OR2L9P-201ENST00000444456 913 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms