Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
PTPN6P29350 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN6P29350 AC022164.1-201ENST00000568767 2673 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN6P29350 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN6P29350 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PTPN6P29350 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PTPN6P29350 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 PPBPP2-201ENST00000513150 1362 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 MTHFD2P5-201ENST00000320415 844 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 SNORA43.1-201ENST00000364863 140 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 RN7SKP121-201ENST00000410842 305 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN6P29350 DHFRP2-201ENST00000414224 547 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN6P29350 AL359885.1-201ENST00000415786 903 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN6P29350 AL390879.1-201ENST00000439143 386 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN6P29350 RARRES2P3-201ENST00000457739 473 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN6P29350 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN6P29350 H3F3AP5-201ENST00000475267 429 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 RN7SL369P-201ENST00000477138 299 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 GM2AP2-201ENST00000491764 562 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 AC106822.1-201ENST00000502647 526 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 SUMO2P4-201ENST00000504193 276 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN6P29350 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.86□□□□□ -1.47
PTPN6P29350 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN6P29350 CYCSP25-201ENST00000525280 316 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 AC024405.1-201ENST00000532521 1042 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 AP001858.2-201ENST00000536213 601 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.86□□□□□ -1.47
PTPN6P29350 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN6P29350 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.86□□□□□ -1.47
PTPN6P29350 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN6P29350 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.86□□□□□ -1.47
PTPN6P29350 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN6P29350 AC005828.7-201ENST00000607331 556 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 AP003072.5-201ENST00000623872 773 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN6P29350 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN6P29350 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
PTPN6P29350 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
PTPN6P29350 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PTPN6P29350 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN6P29350 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN6P29350 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 AL133243.2-201ENST00000610331 1621 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PTPN6P29350 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN6P29350 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 RPL11P4-201ENST00000332269 436 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN6P29350 AL731534.1-201ENST00000434711 269 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN6P29350 PCNPP2-201ENST00000441651 455 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 OR2L9P-201ENST00000444456 913 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN6P29350 RN7SL168P-201ENST00000463821 279 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 RPL12P31-201ENST00000478433 450 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 RPS27P20-201ENST00000492051 246 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN6P29350 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN6P29350 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms