Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.96□□□□□ -1.45
ABCD3P28288 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ABCD3P28288 AL662795.2-201ENST00000624252 3706 ntBASIC5.96□□□□□ -1.45
ABCD3P28288 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 AC017002.4-201ENST00000604721 1525 ntBASIC5.96□□□□□ -1.46
ABCD3P28288 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.96□□□□□ -1.46
ABCD3P28288 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.96□□□□□ -1.46
ABCD3P28288 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.96□□□□□ -1.46
ABCD3P28288 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.96□□□□□ -1.46
ABCD3P28288 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.96□□□□□ -1.46
ABCD3P28288 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.96□□□□□ -1.46
ABCD3P28288 MED28P4-201ENST00000433137 572 ntBASIC5.96□□□□□ -1.46
ABCD3P28288 Z84478.1-201ENST00000438230 1219 ntBASIC5.96□□□□□ -1.46
ABCD3P28288 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.96□□□□□ -1.46
ABCD3P28288 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.96□□□□□ -1.46
ABCD3P28288 AC092824.1-201ENST00000483524 576 ntBASIC5.96□□□□□ -1.46
ABCD3P28288 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.96□□□□□ -1.46
ABCD3P28288 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.96□□□□□ -1.46
ABCD3P28288 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.96□□□□□ -1.46
ABCD3P28288 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
ABCD3P28288 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.96□□□□□ -1.46
ABCD3P28288 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.96□□□□□ -1.46
ABCD3P28288 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.96□□□□□ -1.46
ABCD3P28288 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.96□□□□□ -1.46
ABCD3P28288 AP002884.5-201ENST00000595053 1132 ntBASIC5.96□□□□□ -1.46
ABCD3P28288 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.96□□□□□ -1.46
ABCD3P28288 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.96□□□□□ -1.46
ABCD3P28288 AC244100.4-201ENST00000617747 388 ntBASIC5.96□□□□□ -1.46
ABCD3P28288 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.96□□□□□ -1.46
ABCD3P28288 MIR6823-201ENST00000622118 61 ntBASIC5.96□□□□□ -1.46
ABCD3P28288 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.96□□□□□ -1.46
ABCD3P28288 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.96□□□□□ -1.46
ABCD3P28288 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.96□□□□□ -1.46
ABCD3P28288 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.96□□□□□ -1.46
ABCD3P28288 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ABCD3P28288 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
ABCD3P28288 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
ABCD3P28288 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ABCD3P28288 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.96□□□□□ -1.46
ABCD3P28288 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.96□□□□□ -1.46
ABCD3P28288 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
ABCD3P28288 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.95□□□□□ -1.46
ABCD3P28288 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ABCD3P28288 AC062029.1-202ENST00000606164 3651 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ABCD3P28288 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.95□□□□□ -1.46
ABCD3P28288 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
ABCD3P28288 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ABCD3P28288 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
ABCD3P28288 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
ABCD3P28288 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ABCD3P28288 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ABCD3P28288 RNA5SP485-201ENST00000365053 119 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 SNORD51.1-201ENST00000365405 77 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ABCD3P28288 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ABCD3P28288 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ABCD3P28288 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ABCD3P28288 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.95□□□□□ -1.46
ABCD3P28288 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 RN7SKP281-201ENST00000410472 352 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 AL360013.1-201ENST00000419031 858 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 AL139184.1-202ENST00000422303 222 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.95□□□□□ -1.46
ABCD3P28288 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.95□□□□□ -1.46
ABCD3P28288 RN7SL836P-201ENST00000476140 296 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.95□□□□□ -1.46
ABCD3P28288 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.95□□□□□ -1.46
ABCD3P28288 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.95□□□□□ -1.46
ABCD3P28288 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.95□□□□□ -1.46
ABCD3P28288 UGT2A3P7-201ENST00000510485 734 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 AC093770.1-201ENST00000511559 571 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 AC022034.1-201ENST00000512867 2156 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.95□□□□□ -1.46
ABCD3P28288 AP003080.1-202ENST00000526526 915 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 AC135983.3-201ENST00000528049 1226 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
ABCD3P28288 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.95□□□□□ -1.46
ABCD3P28288 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.95□□□□□ -1.46
ABCD3P28288 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.95□□□□□ -1.46
ABCD3P28288 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.95□□□□□ -1.46
ABCD3P28288 AC007423.1-201ENST00000605009 627 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 AC005972.3-201ENST00000606304 481 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 AC005021.1-201ENST00000608730 355 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 AC048341.3-201ENST00000619323 491 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 AL022323.4-201ENST00000623980 13120 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.95□□□□□ -1.46
ABCD3P28288 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms