Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.14□□□□□ -1.43
CD40P25942 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.14□□□□□ -1.43
CD40P25942 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.14□□□□□ -1.43
CD40P25942 OR8B1P-202ENST00000641132 1178 ntBASIC6.14□□□□□ -1.43
CD40P25942 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CD40P25942 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.14□□□□□ -1.43
CD40P25942 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CD40P25942 AC011008.2-201ENST00000624866 3352 ntBASIC6.14□□□□□ -1.43
CD40P25942 Z98755.1-201ENST00000407015 1384 ntBASIC6.14□□□□□ -1.43
CD40P25942 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CD40P25942 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CD40P25942 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CD40P25942 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CD40P25942 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CD40P25942 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.14□□□□□ -1.43
CD40P25942 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CD40P25942 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CD40P25942 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CD40P25942 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CD40P25942 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CD40P25942 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC6.14□□□□□ -1.43
CD40P25942 AL445250.1-203ENST00000641829 1535 ntBASIC6.14□□□□□ -1.43
CD40P25942 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CD40P25942 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CD40P25942 AC090771.1-201ENST00000585803 1618 ntBASIC6.14□□□□□ -1.43
CD40P25942 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CD40P25942 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CD40P25942 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 BX005019.1-201ENST00000561881 1810 ntBASIC6.13□□□□□ -1.43
CD40P25942 AC008555.1-201ENST00000561778 2757 ntBASIC6.13□□□□□ -1.43
CD40P25942 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.13□□□□□ -1.43
CD40P25942 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.13□□□□□ -1.43
CD40P25942 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 SNORD113-6-201ENST00000363345 75 ntBASIC6.13□□□□□ -1.43
CD40P25942 RNU6-1017P-201ENST00000363613 106 ntBASIC6.13□□□□□ -1.43
CD40P25942 Y_RNA.318-201ENST00000365131 97 ntBASIC6.13□□□□□ -1.43
CD40P25942 SNORD116.1-201ENST00000365628 92 ntBASIC6.13□□□□□ -1.43
CD40P25942 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 MIR99A-201ENST00000384906 81 ntBASIC6.13□□□□□ -1.43
CD40P25942 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 RAP1BP1-201ENST00000412709 553 ntBASIC6.13□□□□□ -1.43
CD40P25942 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 AC013404.1-201ENST00000413068 249 ntBASIC6.13□□□□□ -1.43
CD40P25942 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.13□□□□□ -1.43
CD40P25942 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.13□□□□□ -1.43
CD40P25942 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.13□□□□□ -1.43
CD40P25942 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.13□□□□□ -1.43
CD40P25942 YWHAEP5-201ENST00000431545 765 ntBASIC6.13□□□□□ -1.43
CD40P25942 MYO5BP3-201ENST00000431872 1279 ntBASIC6.13□□□□□ -1.43
CD40P25942 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 AL604028.2-201ENST00000437848 788 ntBASIC6.13□□□□□ -1.43
CD40P25942 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.13□□□□□ -1.43
CD40P25942 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.13□□□□□ -1.43
CD40P25942 AURKAPS1-201ENST00000451805 1212 ntBASIC6.13□□□□□ -1.43
CD40P25942 AL445669.2-201ENST00000454425 421 ntBASIC6.13□□□□□ -1.43
CD40P25942 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.13□□□□□ -1.43
CD40P25942 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.13□□□□□ -1.43
CD40P25942 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.13□□□□□ -1.43
CD40P25942 AC107015.1-201ENST00000466902 747 ntBASIC6.13□□□□□ -1.43
CD40P25942 AP005202.1-201ENST00000489915 867 ntBASIC6.13□□□□□ -1.43
CD40P25942 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.13□□□□□ -1.43
CD40P25942 CARSP2-201ENST00000520688 277 ntBASIC6.13□□□□□ -1.43
CD40P25942 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.13□□□□□ -1.43
CD40P25942 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC6.13□□□□□ -1.43
CD40P25942 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.13□□□□□ -1.43
CD40P25942 AC013283.1-201ENST00000557282 492 ntBASIC6.13□□□□□ -1.43
CD40P25942 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.13□□□□□ -1.43
CD40P25942 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 MTCYBP33-201ENST00000575007 1130 ntBASIC6.13□□□□□ -1.43
CD40P25942 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.13□□□□□ -1.43
CD40P25942 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.13□□□□□ -1.43
CD40P25942 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.13□□□□□ -1.43
CD40P25942 AC025165.5-201ENST00000602802 578 ntBASIC6.13□□□□□ -1.43
CD40P25942 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 AL451086.1-201ENST00000605596 223 ntBASIC6.13□□□□□ -1.43
CD40P25942 AL583856.2-201ENST00000606298 543 ntBASIC6.13□□□□□ -1.43
CD40P25942 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.13□□□□□ -1.43
CD40P25942 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.13□□□□□ -1.43
CD40P25942 VN1R74P-201ENST00000613259 503 ntBASIC6.13□□□□□ -1.43
CD40P25942 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.13□□□□□ -1.43
CD40P25942 AC140479.4-205ENST00000636339 820 ntBASIC6.13□□□□□ -1.43
CD40P25942 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 AC119674.1-212ENST00000641155 993 ntBASIC6.13□□□□□ -1.43
CD40P25942 DDX18P5-201ENST00000534547 1306 ntBASIC6.13□□□□□ -1.43
CD40P25942 AC104446.1-201ENST00000613728 1321 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms