Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HOXC4P09017 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
HOXC4P09017 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.99□□□□□ -1.45
HOXC4P09017 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HOXC4P09017 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HOXC4P09017 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HOXC4P09017 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
HOXC4P09017 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.99□□□□□ -1.45
HOXC4P09017 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.99□□□□□ -1.45
HOXC4P09017 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.99□□□□□ -1.45
HOXC4P09017 AC016027.4-201ENST00000450866 277 ntBASIC5.99□□□□□ -1.45
HOXC4P09017 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 AC073594.1-201ENST00000462065 364 ntBASIC5.99□□□□□ -1.45
HOXC4P09017 AC023245.1-201ENST00000468501 517 ntBASIC5.99□□□□□ -1.45
HOXC4P09017 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.99□□□□□ -1.45
HOXC4P09017 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 OR5H7P-201ENST00000514084 930 ntBASIC5.99□□□□□ -1.45
HOXC4P09017 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.99□□□□□ -1.45
HOXC4P09017 CYP4F27P-201ENST00000514557 494 ntBASIC5.99□□□□□ -1.45
HOXC4P09017 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.99□□□□□ -1.45
HOXC4P09017 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HOXC4P09017 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HOXC4P09017 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.99□□□□□ -1.45
HOXC4P09017 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.99□□□□□ -1.45
HOXC4P09017 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 AC020916.2-201ENST00000591242 360 ntBASIC5.99□□□□□ -1.45
HOXC4P09017 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HOXC4P09017 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
HOXC4P09017 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.99□□□□□ -1.45
HOXC4P09017 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HOXC4P09017 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.99□□□□□ -1.45
HOXC4P09017 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXC4P09017 AC024587.1-201ENST00000505925 2157 ntBASIC5.99□□□□□ -1.45
HOXC4P09017 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
HOXC4P09017 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC4P09017 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXC4P09017 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
HOXC4P09017 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXC4P09017 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC4P09017 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 AL353626.3-201ENST00000413399 657 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC4P09017 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXC4P09017 AL035660.1-201ENST00000422041 222 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 CDY8P-201ENST00000428380 1279 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 AL512605.1-202ENST00000441919 381 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 AL359955.2-201ENST00000445380 353 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 CDY20P-201ENST00000447528 1279 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 RPL7L1P3-201ENST00000455249 689 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 AL122020.1-201ENST00000472287 459 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 SETP21-201ENST00000514799 892 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 Y_RNA.667-201ENST00000516212 107 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 RNA5SP438-201ENST00000516561 112 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.98□□□□□ -1.45
HOXC4P09017 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC4P09017 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXC4P09017 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXC4P09017 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXC4P09017 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC4P09017 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC4P09017 PSG10P-201ENST00000501199 1500 ntBASIC5.98□□□□□ -1.45
HOXC4P09017 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HOXC4P09017 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HOXC4P09017 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC4P09017 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC4P09017 AF287957.1-201ENST00000607368 1595 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC4P09017 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
HOXC4P09017 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC4P09017 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HOXC4P09017 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXC4P09017 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms