Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TPM3P06753 AP005435.3-201ENST00000531260 3198 ntBASIC6.76□□□□□ -1.33
TPM3P06753 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TPM3P06753 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
TPM3P06753 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TPM3P06753 RPL11P3-201ENST00000395256 523 ntBASIC6.76□□□□□ -1.33
TPM3P06753 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
TPM3P06753 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM3P06753 RN7SKP117-201ENST00000410175 264 ntBASIC6.76□□□□□ -1.33
TPM3P06753 RN7SKP39-201ENST00000410773 322 ntBASIC6.76□□□□□ -1.33
TPM3P06753 RN7SKP166-201ENST00000410812 305 ntBASIC6.76□□□□□ -1.33
TPM3P06753 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM3P06753 AL136231.1-201ENST00000429407 730 ntBASIC6.76□□□□□ -1.33
TPM3P06753 AL645939.3-201ENST00000435408 225 ntBASIC6.76□□□□□ -1.33
TPM3P06753 EMC3-AS1-205ENST00000438698 534 ntBASIC6.76□□□□□ -1.33
TPM3P06753 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM3P06753 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.76□□□□□ -1.33
TPM3P06753 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
TPM3P06753 AC018645.1-201ENST00000505003 109 ntBASIC6.76□□□□□ -1.33
TPM3P06753 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.76□□□□□ -1.33
TPM3P06753 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM3P06753 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM3P06753 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM3P06753 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.76□□□□□ -1.33
TPM3P06753 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM3P06753 RPL29P33-201ENST00000587474 316 ntBASIC6.76□□□□□ -1.33
TPM3P06753 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.76□□□□□ -1.33
TPM3P06753 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TPM3P06753 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM3P06753 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
TPM3P06753 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
TPM3P06753 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TPM3P06753 AC004158.1-201ENST00000564508 4319 ntBASIC6.76□□□□□ -1.33
TPM3P06753 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.76□□□□□ -1.33
TPM3P06753 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TPM3P06753 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TPM3P06753 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TPM3P06753 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM3P06753 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TPM3P06753 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TPM3P06753 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM3P06753 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM3P06753 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM3P06753 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.75□□□□□ -1.33
TPM3P06753 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM3P06753 AC010894.1-201ENST00000313760 361 ntBASIC6.75□□□□□ -1.33
TPM3P06753 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
TPM3P06753 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.75□□□□□ -1.33
TPM3P06753 AC026310.1-201ENST00000396004 378 ntBASIC6.75□□□□□ -1.33
TPM3P06753 RPL12P23-201ENST00000405880 490 ntBASIC6.75□□□□□ -1.33
TPM3P06753 PPIAP23-201ENST00000420099 497 ntBASIC6.75□□□□□ -1.33
TPM3P06753 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM3P06753 GAPDHP23-201ENST00000444823 993 ntBASIC6.75□□□□□ -1.33
TPM3P06753 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.75□□□□□ -1.33
TPM3P06753 RARRES2P3-201ENST00000457739 473 ntBASIC6.75□□□□□ -1.33
TPM3P06753 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM3P06753 RPS10P28-201ENST00000480396 498 ntBASIC6.75□□□□□ -1.33
TPM3P06753 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.75□□□□□ -1.33
TPM3P06753 SNORA70.11-201ENST00000515987 138 ntBASIC6.75□□□□□ -1.33
TPM3P06753 SNORA70.13-201ENST00000516116 138 ntBASIC6.75□□□□□ -1.33
TPM3P06753 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM3P06753 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
TPM3P06753 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.75□□□□□ -1.33
TPM3P06753 AC090826.1-203ENST00000569235 490 ntBASIC6.75□□□□□ -1.33
TPM3P06753 AC090286.3-201ENST00000573133 187 ntBASIC6.75□□□□□ -1.33
TPM3P06753 AC010998.3-201ENST00000613871 631 ntBASIC6.75□□□□□ -1.33
TPM3P06753 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM3P06753 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.75□□□□□ -1.33
TPM3P06753 AL355974.3-201ENST00000617383 467 ntBASIC6.75□□□□□ -1.33
TPM3P06753 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.75□□□□□ -1.33
TPM3P06753 AC005355.2-201ENST00000625064 484 ntBASIC6.75□□□□□ -1.33
TPM3P06753 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.75□□□□□ -1.33
TPM3P06753 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.75□□□□□ -1.33
TPM3P06753 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM3P06753 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM3P06753 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM3P06753 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM3P06753 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.75□□□□□ -1.33
TPM3P06753 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM3P06753 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.74□□□□□ -1.33
TPM3P06753 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM3P06753 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
TPM3P06753 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM3P06753 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
TPM3P06753 THAP12P9-201ENST00000503971 2360 ntBASIC6.74□□□□□ -1.33
TPM3P06753 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TPM3P06753 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM3P06753 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.74□□□□□ -1.33
TPM3P06753 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM3P06753 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.74□□□□□ -1.33
TPM3P06753 Y_RNA.209-201ENST00000364156 111 ntBASIC6.74□□□□□ -1.33
TPM3P06753 RNA5SP187-201ENST00000384400 119 ntBASIC6.74□□□□□ -1.33
TPM3P06753 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
TPM3P06753 AC087752.1-201ENST00000391360 558 ntBASIC6.74□□□□□ -1.33
TPM3P06753 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM3P06753 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.74□□□□□ -1.33
TPM3P06753 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.74□□□□□ -1.33
TPM3P06753 PPIAP10-201ENST00000438675 458 ntBASIC6.74□□□□□ -1.33
TPM3P06753 RPL5P25-201ENST00000441148 775 ntBASIC6.74□□□□□ -1.33
TPM3P06753 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms