Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.64□□□□□ -1.35
RB1P06400 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RB1P06400 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
RB1P06400 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
RB1P06400 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.64□□□□□ -1.35
RB1P06400 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RB1P06400 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.64□□□□□ -1.35
RB1P06400 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.64□□□□□ -1.35
RB1P06400 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.64□□□□□ -1.35
RB1P06400 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.64□□□□□ -1.35
RB1P06400 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 ZNF658B-201ENST00000602828 3408 ntBASIC6.64□□□□□ -1.35
RB1P06400 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 TMSB4XP2-201ENST00000335179 210 ntBASIC6.64□□□□□ -1.35
RB1P06400 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.64□□□□□ -1.35
RB1P06400 AL513325.1-201ENST00000417716 1034 ntBASIC6.64□□□□□ -1.35
RB1P06400 RPS7P8-201ENST00000418311 581 ntBASIC6.64□□□□□ -1.35
RB1P06400 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.64□□□□□ -1.35
RB1P06400 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.64□□□□□ -1.35
RB1P06400 KATNBL1P2-201ENST00000433311 835 ntBASIC6.64□□□□□ -1.35
RB1P06400 TUBB4BP6-201ENST00000437576 479 ntBASIC6.64□□□□□ -1.35
RB1P06400 AL512605.1-202ENST00000441919 381 ntBASIC6.64□□□□□ -1.35
RB1P06400 AL359955.2-201ENST00000445380 353 ntBASIC6.64□□□□□ -1.35
RB1P06400 FTLP8-201ENST00000446770 267 ntBASIC6.64□□□□□ -1.35
RB1P06400 AL157385.1-201ENST00000446973 268 ntBASIC6.64□□□□□ -1.35
RB1P06400 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.64□□□□□ -1.35
RB1P06400 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.64□□□□□ -1.35
RB1P06400 RN7SL284P-201ENST00000498823 275 ntBASIC6.64□□□□□ -1.35
RB1P06400 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
RB1P06400 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.64□□□□□ -1.35
RB1P06400 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.64□□□□□ -1.35
RB1P06400 WBP1LP3-201ENST00000523033 208 ntBASIC6.64□□□□□ -1.35
RB1P06400 AC021269.1-201ENST00000526860 705 ntBASIC6.64□□□□□ -1.35
RB1P06400 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RB1P06400 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.64□□□□□ -1.35
RB1P06400 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.64□□□□□ -1.35
RB1P06400 AC079791.1-201ENST00000605356 973 ntBASIC6.64□□□□□ -1.35
RB1P06400 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.64□□□□□ -1.35
RB1P06400 MIR6809-201ENST00000612189 116 ntBASIC6.64□□□□□ -1.35
RB1P06400 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.64□□□□□ -1.35
RB1P06400 AL596275.2-208ENST00000641192 594 ntBASIC6.64□□□□□ -1.35
RB1P06400 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.64□□□□□ -1.35
RB1P06400 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
RB1P06400 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 RBPJP7-201ENST00000442803 1447 ntBASIC6.64□□□□□ -1.35
RB1P06400 RBPJP5-201ENST00000449433 1447 ntBASIC6.64□□□□□ -1.35
RB1P06400 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
RB1P06400 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
RB1P06400 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.64□□□□□ -1.35
RB1P06400 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.63□□□□□ -1.35
RB1P06400 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RB1P06400 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
RB1P06400 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RB1P06400 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
RB1P06400 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
RB1P06400 RNU1-150P-201ENST00000362491 162 ntBASIC6.63□□□□□ -1.35
RB1P06400 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.63□□□□□ -1.35
RB1P06400 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
RB1P06400 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.63□□□□□ -1.35
RB1P06400 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RB1P06400 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RB1P06400 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
RB1P06400 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
RB1P06400 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.63□□□□□ -1.35
RB1P06400 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.63□□□□□ -1.35
RB1P06400 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.63□□□□□ -1.35
RB1P06400 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.63□□□□□ -1.35
RB1P06400 AP004289.1-201ENST00000436307 2205 ntBASIC6.63□□□□□ -1.35
RB1P06400 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.63□□□□□ -1.35
RB1P06400 AC016908.1-201ENST00000442571 1219 ntBASIC6.63□□□□□ -1.35
RB1P06400 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.63□□□□□ -1.35
RB1P06400 RPS26P39-201ENST00000469206 341 ntBASIC6.63□□□□□ -1.35
RB1P06400 AL122020.1-201ENST00000472287 459 ntBASIC6.63□□□□□ -1.35
RB1P06400 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.63□□□□□ -1.35
RB1P06400 Y_RNA.710-201ENST00000516975 110 ntBASIC6.63□□□□□ -1.35
RB1P06400 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.63□□□□□ -1.35
RB1P06400 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.63□□□□□ -1.35
RB1P06400 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.63□□□□□ -1.35
RB1P06400 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.63□□□□□ -1.35
RB1P06400 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.63□□□□□ -1.35
RB1P06400 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.63□□□□□ -1.35
RB1P06400 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.63□□□□□ -1.35
RB1P06400 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.63□□□□□ -1.35
RB1P06400 AC016180.1-201ENST00000567945 403 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms