Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC3.57□□□□□ -1.84
APOBP04114 RN7SL354P-201ENST00000469282 294 ntBASIC3.57□□□□□ -1.84
APOBP04114 AC087672.1-201ENST00000479876 766 ntBASIC3.57□□□□□ -1.84
APOBP04114 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBP04114 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.57□□□□□ -1.84
APOBP04114 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.57□□□□□ -1.84
APOBP04114 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 KCNMB3P1-202ENST00000493696 3389 ntBASIC3.57□□□□□ -1.84
APOBP04114 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
APOBP04114 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBP04114 FHIT-201ENST00000341848 174 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBP04114 AC090638.1-201ENST00000498296 909 ntBASIC3.57□□□□□ -1.84
APOBP04114 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBP04114 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBP04114 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
APOBP04114 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.57□□□□□ -1.84
APOBP04114 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBP04114 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC3.57□□□□□ -1.84
APOBP04114 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBP04114 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC3.57□□□□□ -1.84
APOBP04114 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 BX322650.1-201ENST00000332359 2143 ntBASIC3.57□□□□□ -1.84
APOBP04114 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBP04114 SALL4P7-201ENST00000555779 3120 ntBASIC3.57□□□□□ -1.84
APOBP04114 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
APOBP04114 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 ATM-215ENST00000530958 5718 ntTSL 2 BASIC3.56□□□□□ -1.84
APOBP04114 SLC35E1P1-201ENST00000419313 864 ntBASIC3.56□□□□□ -1.84
APOBP04114 AC126120.1-201ENST00000431082 470 ntBASIC3.56□□□□□ -1.84
APOBP04114 CYCSP6-201ENST00000434498 302 ntBASIC3.56□□□□□ -1.84
APOBP04114 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC3.56□□□□□ -1.84
APOBP04114 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC3.56□□□□□ -1.84
APOBP04114 AC020910.2-201ENST00000603635 610 ntBASIC3.56□□□□□ -1.84
APOBP04114 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
APOBP04114 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 AL391261.1-201ENST00000555712 1479 ntBASIC3.56□□□□□ -1.84
APOBP04114 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 AL121768.1-201ENST00000613917 2544 ntBASIC3.56□□□□□ -1.84
APOBP04114 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.56□□□□□ -1.84
APOBP04114 RPL36AP15-201ENST00000444514 266 ntBASIC3.56□□□□□ -1.84
APOBP04114 AC008629.2-201ENST00000503783 483 ntBASIC3.56□□□□□ -1.84
APOBP04114 RAB9BP1-201ENST00000519581 626 ntBASIC3.56□□□□□ -1.84
APOBP04114 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC3.56□□□□□ -1.84
APOBP04114 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.56□□□□□ -1.84
APOBP04114 AL139099.4-201ENST00000614802 114 ntBASIC3.56□□□□□ -1.84
APOBP04114 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 MAPK10-350ENST00000641777 965 ntBASIC3.56□□□□□ -1.84
APOBP04114 AL353795.3-201ENST00000624351 5702 ntBASIC3.56□□□□□ -1.84
APOBP04114 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
APOBP04114 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC3.56□□□□□ -1.84
APOBP04114 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
APOBP04114 ING3-204ENST00000431467 1447 ntTSL 2 BASIC3.56□□□□□ -1.84
APOBP04114 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 AOX3P-204ENST00000491025 2107 ntBASIC3.56□□□□□ -1.84
APOBP04114 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 AL133388.1-201ENST00000404509 287 ntBASIC3.56□□□□□ -1.84
APOBP04114 RPS6P23-201ENST00000413224 722 ntBASIC3.56□□□□□ -1.84
APOBP04114 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 AC026979.1-201ENST00000492525 396 ntBASIC3.56□□□□□ -1.84
APOBP04114 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC3.56□□□□□ -1.84
APOBP04114 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 AC090527.3-201ENST00000619041 548 ntBASIC3.56□□□□□ -1.84
APOBP04114 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
APOBP04114 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
APOBP04114 CPS1-IT1-201ENST00000628368 2306 ntBASIC3.56□□□□□ -1.84
APOBP04114 CASC19-281ENST00000642118 1554 ntBASIC3.56□□□□□ -1.84
APOBP04114 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
APOBP04114 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms