Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.69□□□□□ -1.5
MT-ND1P03886 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
MT-ND1P03886 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.69□□□□□ -1.5
MT-ND1P03886 MIR1266-201ENST00000408125 84 ntBASIC5.69□□□□□ -1.5
MT-ND1P03886 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MT-ND1P03886 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.69□□□□□ -1.5
MT-ND1P03886 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.69□□□□□ -1.5
MT-ND1P03886 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.69□□□□□ -1.5
MT-ND1P03886 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.69□□□□□ -1.5
MT-ND1P03886 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MT-ND1P03886 RN7SL369P-201ENST00000477138 299 ntBASIC5.69□□□□□ -1.5
MT-ND1P03886 RPS7P11-201ENST00000484240 586 ntBASIC5.69□□□□□ -1.5
MT-ND1P03886 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.69□□□□□ -1.5
MT-ND1P03886 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.69□□□□□ -1.5
MT-ND1P03886 RNA5SP418-201ENST00000515951 117 ntBASIC5.69□□□□□ -1.5
MT-ND1P03886 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
MT-ND1P03886 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.69□□□□□ -1.5
MT-ND1P03886 AC136777.2-201ENST00000522979 358 ntBASIC5.69□□□□□ -1.5
MT-ND1P03886 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.69□□□□□ -1.5
MT-ND1P03886 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.69□□□□□ -1.5
MT-ND1P03886 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.69□□□□□ -1.5
MT-ND1P03886 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.69□□□□□ -1.5
MT-ND1P03886 AC060766.1-201ENST00000590824 627 ntBASIC5.69□□□□□ -1.5
MT-ND1P03886 AC025857.2-201ENST00000602711 238 ntBASIC5.69□□□□□ -1.5
MT-ND1P03886 SNORA74.4-201ENST00000607595 199 ntBASIC5.69□□□□□ -1.5
MT-ND1P03886 AL008582.1-201ENST00000609612 442 ntBASIC5.69□□□□□ -1.5
MT-ND1P03886 RN7SL261P-201ENST00000613441 282 ntBASIC5.69□□□□□ -1.5
MT-ND1P03886 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MT-ND1P03886 AC068213.1-201ENST00000625124 226 ntBASIC5.69□□□□□ -1.5
MT-ND1P03886 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MT-ND1P03886 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
MT-ND1P03886 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MT-ND1P03886 AC116158.1-201ENST00000560231 2129 ntBASIC5.69□□□□□ -1.5
MT-ND1P03886 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.69□□□□□ -1.5
MT-ND1P03886 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MT-ND1P03886 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MT-ND1P03886 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MT-ND1P03886 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.69□□□□□ -1.5
MT-ND1P03886 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MT-ND1P03886 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
MT-ND1P03886 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.69□□□□□ -1.5
MT-ND1P03886 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MT-ND1P03886 AC232271.1-201ENST00000602455 2715 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 AC130360.2-201ENST00000533477 1556 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
MT-ND1P03886 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
MT-ND1P03886 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
MT-ND1P03886 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
MT-ND1P03886 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
MT-ND1P03886 AL033519.1-201ENST00000407266 307 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.68□□□□□ -1.5
MT-ND1P03886 SETP9-201ENST00000423837 832 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 GPN3P1-201ENST00000423883 535 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 KRT8P51-201ENST00000438938 274 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.68□□□□□ -1.5
MT-ND1P03886 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.68□□□□□ -1.5
MT-ND1P03886 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.68□□□□□ -1.5
MT-ND1P03886 AC063955.1-201ENST00000462872 685 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 AP003385.3-201ENST00000472498 287 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.68□□□□□ -1.5
MT-ND1P03886 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.68□□□□□ -1.5
MT-ND1P03886 AC093816.1-201ENST00000515076 913 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.68□□□□□ -1.5
MT-ND1P03886 Y_RNA.710-201ENST00000516975 110 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 RN7SKP5-201ENST00000517045 272 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.68□□□□□ -1.5
MT-ND1P03886 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.68□□□□□ -1.5
MT-ND1P03886 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.68□□□□□ -1.5
MT-ND1P03886 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.68□□□□□ -1.5
MT-ND1P03886 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.68□□□□□ -1.5
MT-ND1P03886 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.68□□□□□ -1.5
MT-ND1P03886 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.68□□□□□ -1.5
MT-ND1P03886 AL591222.2-201ENST00000604443 754 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 AL591167.1-201ENST00000607321 456 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.68□□□□□ -1.5
MT-ND1P03886 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 MIR6503-201ENST00000622884 86 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
MT-ND1P03886 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
MT-ND1P03886 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 AC092451.3-201ENST00000625067 1343 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 AL591135.1-201ENST00000401578 5914 ntBASIC5.68□□□□□ -1.5
MT-ND1P03886 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.68□□□□□ -1.5
MT-ND1P03886 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MT-ND1P03886 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
MT-ND1P03886 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.67□□□□□ -1.5
MT-ND1P03886 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms