Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.44□□□□□ -1.38
APOEP02649 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.44□□□□□ -1.38
APOEP02649 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.44□□□□□ -1.38
APOEP02649 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.44□□□□□ -1.38
APOEP02649 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.44□□□□□ -1.38
APOEP02649 RN7SL170P-201ENST00000487098 295 ntBASIC6.44□□□□□ -1.38
APOEP02649 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
APOEP02649 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.44□□□□□ -1.38
APOEP02649 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.44□□□□□ -1.38
APOEP02649 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.44□□□□□ -1.38
APOEP02649 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.44□□□□□ -1.38
APOEP02649 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.44□□□□□ -1.38
APOEP02649 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.44□□□□□ -1.38
APOEP02649 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.44□□□□□ -1.38
APOEP02649 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.44□□□□□ -1.38
APOEP02649 MIR4420-201ENST00000583944 77 ntBASIC6.44□□□□□ -1.38
APOEP02649 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.44□□□□□ -1.38
APOEP02649 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.44□□□□□ -1.38
APOEP02649 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
APOEP02649 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
APOEP02649 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
APOEP02649 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
APOEP02649 EIF3EP1-201ENST00000433978 1316 ntBASIC6.44□□□□□ -1.38
APOEP02649 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
APOEP02649 AC092692.1-201ENST00000623625 2595 ntBASIC6.44□□□□□ -1.38
APOEP02649 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
APOEP02649 AL121839.2-201ENST00000565058 6943 ntBASIC6.44□□□□□ -1.38
APOEP02649 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.44□□□□□ -1.38
APOEP02649 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
APOEP02649 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
APOEP02649 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
APOEP02649 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
APOEP02649 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
APOEP02649 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.43□□□□□ -1.38
APOEP02649 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
APOEP02649 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
APOEP02649 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.43□□□□□ -1.38
APOEP02649 AC130360.1-201ENST00000425489 1117 ntBASIC6.43□□□□□ -1.38
APOEP02649 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.43□□□□□ -1.38
APOEP02649 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.43□□□□□ -1.38
APOEP02649 GAPDHP23-201ENST00000444823 993 ntBASIC6.43□□□□□ -1.38
APOEP02649 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.43□□□□□ -1.38
APOEP02649 AC009963.3-201ENST00000458090 486 ntBASIC6.43□□□□□ -1.38
APOEP02649 AL022319.1-201ENST00000458183 1167 ntBASIC6.43□□□□□ -1.38
APOEP02649 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.43□□□□□ -1.38
APOEP02649 AC093815.1-201ENST00000508637 280 ntBASIC6.43□□□□□ -1.38
APOEP02649 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.43□□□□□ -1.38
APOEP02649 AC130365.2-201ENST00000525882 1201 ntBASIC6.43□□□□□ -1.38
APOEP02649 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.43□□□□□ -1.38
APOEP02649 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.43□□□□□ -1.38
APOEP02649 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.43□□□□□ -1.38
APOEP02649 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.43□□□□□ -1.38
APOEP02649 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
APOEP02649 AC007346.1-201ENST00000569208 867 ntBASIC6.43□□□□□ -1.38
APOEP02649 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
APOEP02649 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.43□□□□□ -1.38
APOEP02649 MIR3189-201ENST00000578735 73 ntBASIC6.43□□□□□ -1.38
APOEP02649 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
APOEP02649 AC124916.2-201ENST00000604416 224 ntBASIC6.43□□□□□ -1.38
APOEP02649 AL021368.3-201ENST00000607119 578 ntBASIC6.43□□□□□ -1.38
APOEP02649 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.43□□□□□ -1.38
APOEP02649 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.43□□□□□ -1.38
APOEP02649 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
APOEP02649 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
APOEP02649 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.43□□□□□ -1.38
APOEP02649 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
APOEP02649 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.43□□□□□ -1.38
APOEP02649 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
APOEP02649 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.43□□□□□ -1.38
APOEP02649 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
APOEP02649 AP001541.1-201ENST00000623322 1904 ntBASIC6.42□□□□□ -1.38
APOEP02649 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.42□□□□□ -1.38
APOEP02649 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.42□□□□□ -1.38
APOEP02649 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
APOEP02649 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
APOEP02649 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.42□□□□□ -1.38
APOEP02649 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
APOEP02649 AC007562.1-201ENST00000421819 517 ntBASIC6.42□□□□□ -1.38
APOEP02649 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
APOEP02649 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.42□□□□□ -1.38
APOEP02649 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.42□□□□□ -1.38
APOEP02649 AC079922.1-201ENST00000443291 359 ntBASIC6.42□□□□□ -1.38
APOEP02649 AC023274.2-201ENST00000445264 521 ntBASIC6.42□□□□□ -1.38
APOEP02649 RPS27AP3-201ENST00000453803 454 ntBASIC6.42□□□□□ -1.38
APOEP02649 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.42□□□□□ -1.38
APOEP02649 RPL37P23-201ENST00000492641 294 ntBASIC6.42□□□□□ -1.38
APOEP02649 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC6.42□□□□□ -1.38
APOEP02649 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.42□□□□□ -1.38
APOEP02649 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
APOEP02649 AC007494.1-201ENST00000562293 760 ntBASIC6.42□□□□□ -1.38
APOEP02649 MIR4701-201ENST00000583094 63 ntBASIC6.42□□□□□ -1.38
APOEP02649 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms