Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.61□□□□□ -1.51
SPTA1P02549 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.61□□□□□ -1.51
SPTA1P02549 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.61□□□□□ -1.51
SPTA1P02549 AC005332.4-201ENST00000592752 579 ntBASIC5.61□□□□□ -1.51
SPTA1P02549 MIR378J-201ENST00000611988 109 ntBASIC5.61□□□□□ -1.51
SPTA1P02549 MRPL57P1-201ENST00000621486 265 ntBASIC5.61□□□□□ -1.51
SPTA1P02549 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.61□□□□□ -1.51
SPTA1P02549 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.61□□□□□ -1.51
SPTA1P02549 LINC02019-201ENST00000608605 2060 ntBASIC5.61□□□□□ -1.51
SPTA1P02549 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SPTA1P02549 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC5.61□□□□□ -1.51
SPTA1P02549 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SPTA1P02549 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC5.61□□□□□ -1.51
SPTA1P02549 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.61□□□□□ -1.51
SPTA1P02549 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 BX323845.3-201ENST00000428215 527 ntBASIC5.6□□□□□ -1.51
SPTA1P02549 AC245047.1-201ENST00000433276 873 ntBASIC5.6□□□□□ -1.51
SPTA1P02549 AC005077.1-201ENST00000449226 375 ntBASIC5.6□□□□□ -1.51
SPTA1P02549 SUMO2P10-201ENST00000452006 288 ntBASIC5.6□□□□□ -1.51
SPTA1P02549 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.6□□□□□ -1.51
SPTA1P02549 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.6□□□□□ -1.51
SPTA1P02549 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.6□□□□□ -1.51
SPTA1P02549 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC5.6□□□□□ -1.51
SPTA1P02549 CASC19-264ENST00000641912 1184 ntBASIC5.6□□□□□ -1.51
SPTA1P02549 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SPTA1P02549 AL353743.3-201ENST00000442109 1468 ntBASIC5.6□□□□□ -1.51
SPTA1P02549 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SPTA1P02549 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.6□□□□□ -1.51
SPTA1P02549 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SPTA1P02549 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SPTA1P02549 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SPTA1P02549 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
SPTA1P02549 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SPTA1P02549 RN7SKP273-201ENST00000411392 314 ntBASIC5.6□□□□□ -1.51
SPTA1P02549 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.6□□□□□ -1.51
SPTA1P02549 AL133445.1-201ENST00000467051 452 ntBASIC5.6□□□□□ -1.51
SPTA1P02549 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.6□□□□□ -1.51
SPTA1P02549 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.6□□□□□ -1.51
SPTA1P02549 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.6□□□□□ -1.51
SPTA1P02549 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.6□□□□□ -1.51
SPTA1P02549 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.6□□□□□ -1.51
SPTA1P02549 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.6□□□□□ -1.51
SPTA1P02549 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.6□□□□□ -1.51
SPTA1P02549 IL24-207ENST00000611909 1621 ntTSL 3 BASIC5.6□□□□□ -1.51
SPTA1P02549 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC5.6□□□□□ -1.51
SPTA1P02549 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SPTA1P02549 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC5.6□□□□□ -1.51
SPTA1P02549 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.6□□□□□ -1.51
SPTA1P02549 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SPTA1P02549 KYNUP3-201ENST00000574386 1341 ntBASIC5.6□□□□□ -1.51
SPTA1P02549 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
SPTA1P02549 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 RNU1-49P-201ENST00000363468 159 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 NDUFS5P5-201ENST00000437256 321 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 SUMO2P3-201ENST00000438311 288 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.59□□□□□ -1.51
SPTA1P02549 OR4A13P-201ENST00000529316 942 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 PCNAP4-201ENST00000532690 730 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.59□□□□□ -1.51
SPTA1P02549 AC087763.1-201ENST00000603391 286 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 AC090510.2-201ENST00000617465 629 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.59□□□□□ -1.51
SPTA1P02549 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
SPTA1P02549 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
SPTA1P02549 CUBNP3-201ENST00000457461 1784 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SPTA1P02549 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SPTA1P02549 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SPTA1P02549 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SPTA1P02549 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.59□□□□□ -1.51
SPTA1P02549 CYCSP51-201ENST00000443545 318 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 AC073909.1-201ENST00000447112 999 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.59□□□□□ -1.51
SPTA1P02549 AC110056.1-201ENST00000525759 911 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SPTA1P02549 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.59□□□□□ -1.51
SPTA1P02549 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 AL023583.1-201ENST00000607518 1143 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 AL354718.1-201ENST00000619764 589 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 AC130456.6-201ENST00000623745 765 ntBASIC5.59□□□□□ -1.51
SPTA1P02549 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPTA1P02549 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms