Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC023389.2-201ENST00000580031 955 ntBASIC5.74□□□□□ -1.49
SSX4O60224 RN7SL230P-201ENST00000580835 303 ntBASIC5.74□□□□□ -1.49
SSX4O60224 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.74□□□□□ -1.49
SSX4O60224 AL157899.1-201ENST00000604110 936 ntBASIC5.74□□□□□ -1.49
SSX4O60224 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.74□□□□□ -1.49
SSX4O60224 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.74□□□□□ -1.49
SSX4O60224 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.74□□□□□ -1.49
SSX4O60224 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSX4O60224 AL132656.3-201ENST00000606384 1595 ntBASIC5.74□□□□□ -1.49
SSX4O60224 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSX4O60224 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX4O60224 AC109446.4-201ENST00000623235 2755 ntBASIC5.74□□□□□ -1.49
SSX4O60224 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSX4O60224 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX4O60224 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SSX4O60224 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
SSX4O60224 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX4O60224 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSX4O60224 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.73□□□□□ -1.49
SSX4O60224 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 NLRP3P1-201ENST00000622303 1785 ntBASIC5.73□□□□□ -1.49
SSX4O60224 AC079753.1-201ENST00000623243 3868 ntBASIC5.73□□□□□ -1.49
SSX4O60224 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 OR7A2P-201ENST00000304105 930 ntBASIC5.73□□□□□ -1.49
SSX4O60224 RNU6-819P-201ENST00000364116 107 ntBASIC5.73□□□□□ -1.49
SSX4O60224 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.73□□□□□ -1.49
SSX4O60224 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SSX4O60224 RN7SKP86-201ENST00000410454 332 ntBASIC5.73□□□□□ -1.49
SSX4O60224 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX4O60224 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX4O60224 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX4O60224 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX4O60224 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX4O60224 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX4O60224 AC245452.2-201ENST00000435222 392 ntBASIC5.73□□□□□ -1.49
SSX4O60224 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 AC097359.1-201ENST00000447946 463 ntBASIC5.73□□□□□ -1.49
SSX4O60224 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX4O60224 AC099340.1-201ENST00000475247 599 ntBASIC5.73□□□□□ -1.49
SSX4O60224 AC005017.1-201ENST00000482002 490 ntBASIC5.73□□□□□ -1.49
SSX4O60224 AC091849.1-201ENST00000509920 121 ntBASIC5.73□□□□□ -1.49
SSX4O60224 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX4O60224 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX4O60224 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.73□□□□□ -1.49
SSX4O60224 TDGP1-201ENST00000543961 1229 ntBASIC5.73□□□□□ -1.49
SSX4O60224 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX4O60224 SNRPGP1-201ENST00000553864 222 ntBASIC5.73□□□□□ -1.49
SSX4O60224 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
SSX4O60224 AC090888.3-201ENST00000558917 509 ntBASIC5.73□□□□□ -1.49
SSX4O60224 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX4O60224 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 AC025283.1-201ENST00000572039 734 ntBASIC5.73□□□□□ -1.49
SSX4O60224 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX4O60224 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX4O60224 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX4O60224 AC024589.2-201ENST00000605642 1294 ntBASIC5.73□□□□□ -1.49
SSX4O60224 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX4O60224 AC073592.6-201ENST00000624271 415 ntBASIC5.73□□□□□ -1.49
SSX4O60224 AP000577.1-201ENST00000624366 878 ntBASIC5.73□□□□□ -1.49
SSX4O60224 AC073593.1-201ENST00000624500 411 ntBASIC5.73□□□□□ -1.49
SSX4O60224 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX4O60224 AL139254.3-201ENST00000641097 674 ntBASIC5.73□□□□□ -1.49
SSX4O60224 AL121936.2-201ENST00000641935 662 ntBASIC5.73□□□□□ -1.49
SSX4O60224 AC025470.1-201ENST00000510053 2032 ntBASIC5.73□□□□□ -1.49
SSX4O60224 AL359976.1-201ENST00000418655 3528 ntBASIC5.73□□□□□ -1.49
SSX4O60224 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
SSX4O60224 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.73□□□□□ -1.49
SSX4O60224 AC020658.2-201ENST00000559030 4020 ntBASIC5.73□□□□□ -1.49
SSX4O60224 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX4O60224 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SSX4O60224 NEK2P2-201ENST00000438441 1338 ntBASIC5.73□□□□□ -1.49
SSX4O60224 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX4O60224 MTCO1P25-201ENST00000414449 1799 ntBASIC5.72□□□□□ -1.49
SSX4O60224 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX4O60224 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX4O60224 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX4O60224 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX4O60224 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX4O60224 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX4O60224 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX4O60224 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms