Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC021146.10-201ENST00000515628 706 ntBASIC10.32□□□□□ -0.76
CUX2O14529 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
CUX2O14529 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC10.32□□□□□ -0.76
CUX2O14529 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC10.32□□□□□ -0.76
CUX2O14529 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC10.32□□□□□ -0.76
CUX2O14529 AC126915.2-201ENST00000610957 190 ntBASIC10.32□□□□□ -0.76
CUX2O14529 AC022919.1-201ENST00000624979 626 ntBASIC10.32□□□□□ -0.76
CUX2O14529 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
CUX2O14529 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CUX2O14529 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC10.32□□□□□ -0.76
CUX2O14529 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CUX2O14529 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC10.32□□□□□ -0.76
CUX2O14529 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CUX2O14529 CLCA3P-203ENST00000490028 2781 ntBASIC10.32□□□□□ -0.76
CUX2O14529 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
CUX2O14529 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
CUX2O14529 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC10.32□□□□□ -0.76
CUX2O14529 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
CUX2O14529 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC10.31□□□□□ -0.76
CUX2O14529 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC10.31□□□□□ -0.76
CUX2O14529 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC10.31□□□□□ -0.76
CUX2O14529 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC10.31□□□□□ -0.76
CUX2O14529 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC10.31□□□□□ -0.76
CUX2O14529 RN7SL481P-201ENST00000477764 299 ntBASIC10.31□□□□□ -0.76
CUX2O14529 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC10.31□□□□□ -0.76
CUX2O14529 DCN-209ENST00000546745 1026 ntTSL 3 BASIC10.31□□□□□ -0.76
CUX2O14529 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC10.31□□□□□ -0.76
CUX2O14529 AC027229.1-201ENST00000583887 253 ntBASIC10.31□□□□□ -0.76
CUX2O14529 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC10.31□□□□□ -0.76
CUX2O14529 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 AC006058.1-201ENST00000568686 5067 ntBASIC10.31□□□□□ -0.76
CUX2O14529 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
CUX2O14529 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC10.31□□□□□ -0.76
CUX2O14529 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC10.31□□□□□ -0.76
CUX2O14529 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 FO082842.1-201ENST00000423552 1370 ntBASIC10.31□□□□□ -0.76
CUX2O14529 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC10.31□□□□□ -0.76
CUX2O14529 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CUX2O14529 HSPA8P18-201ENST00000439846 1928 ntBASIC10.31□□□□□ -0.76
CUX2O14529 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
CUX2O14529 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
CUX2O14529 AC100871.1-201ENST00000507871 1456 ntBASIC10.3□□□□□ -0.76
CUX2O14529 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC10.3□□□□□ -0.76
CUX2O14529 OR2M1P-201ENST00000318104 951 ntBASIC10.3□□□□□ -0.76
CUX2O14529 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
CUX2O14529 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC10.3□□□□□ -0.76
CUX2O14529 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC10.3□□□□□ -0.76
CUX2O14529 RANP2-201ENST00000456833 229 ntBASIC10.3□□□□□ -0.76
CUX2O14529 RNU6ATAC24P-201ENST00000516811 135 ntBASIC10.3□□□□□ -0.76
CUX2O14529 OR5AZ1P-201ENST00000527448 943 ntBASIC10.3□□□□□ -0.76
CUX2O14529 AC009120.3-201ENST00000563335 499 ntBASIC10.3□□□□□ -0.76
CUX2O14529 MIR1254-2-201ENST00000579553 63 ntBASIC10.3□□□□□ -0.76
CUX2O14529 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC10.3□□□□□ -0.76
CUX2O14529 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC10.3□□□□□ -0.76
CUX2O14529 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC10.3□□□□□ -0.76
CUX2O14529 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC10.3□□□□□ -0.76
CUX2O14529 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CUX2O14529 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
CUX2O14529 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CUX2O14529 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CUX2O14529 AC110373.1-201ENST00000505994 3505 ntBASIC10.3□□□□□ -0.76
CUX2O14529 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CUX2O14529 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CUX2O14529 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CUX2O14529 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CUX2O14529 AC005332.9-201ENST00000620266 2921 ntBASIC10.3□□□□□ -0.76
CUX2O14529 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC10.3□□□□□ -0.76
CUX2O14529 CTAGE11P-201ENST00000451540 2353 ntBASIC10.3□□□□□ -0.76
CUX2O14529 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
CUX2O14529 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CUX2O14529 PARN-201ENST00000341484 2100 ntTSL 2 BASIC10.3□□□□□ -0.76
CUX2O14529 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC10.3□□□□□ -0.76
CUX2O14529 AC091965.3-201ENST00000506236 208 ntBASIC10.3□□□□□ -0.76
CUX2O14529 IGBP1P5-201ENST00000507524 1000 ntBASIC10.3□□□□□ -0.76
CUX2O14529 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC10.3□□□□□ -0.76
CUX2O14529 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC10.3□□□□□ -0.76
CUX2O14529 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC10.3□□□□□ -0.76
CUX2O14529 BNIP3P1-201ENST00000547295 580 ntBASIC10.3□□□□□ -0.76
CUX2O14529 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC10.3□□□□□ -0.76
CUX2O14529 SS18L2P2-201ENST00000583960 235 ntBASIC10.3□□□□□ -0.76
CUX2O14529 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CUX2O14529 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CUX2O14529 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC10.29□□□□□ -0.76
CUX2O14529 LARS-201ENST00000274562 2213 ntTSL 2 BASIC10.29□□□□□ -0.76
CUX2O14529 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC10.29□□□□□ -0.76
CUX2O14529 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC10.29□□□□□ -0.76
CUX2O14529 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CUX2O14529 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms