Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UPK1AO00322 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
UPK1AO00322 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.72□□□□□ -1.49
UPK1AO00322 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.72□□□□□ -1.49
UPK1AO00322 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.72□□□□□ -1.49
UPK1AO00322 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UPK1AO00322 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
UPK1AO00322 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
UPK1AO00322 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UPK1AO00322 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.72□□□□□ -1.49
UPK1AO00322 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UPK1AO00322 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
UPK1AO00322 THEM7P-201ENST00000419556 672 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UPK1AO00322 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UPK1AO00322 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.72□□□□□ -1.49
UPK1AO00322 AL512593.1-201ENST00000444758 779 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 RPL23AP60-201ENST00000450011 454 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 RAB28P2-201ENST00000454299 641 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.72□□□□□ -1.49
UPK1AO00322 RN7SL836P-201ENST00000476140 296 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 AC098818.1-201ENST00000478593 252 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 AC044810.1-201ENST00000480271 711 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 AC005017.1-201ENST00000482002 490 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 RPS27P20-201ENST00000492051 246 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 RN7SL568P-201ENST00000493069 298 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 HMGN1P17-201ENST00000513734 295 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.72□□□□□ -1.49
UPK1AO00322 NPIPB14P-203ENST00000532298 987 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.72□□□□□ -1.49
UPK1AO00322 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UPK1AO00322 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.72□□□□□ -1.49
UPK1AO00322 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.72□□□□□ -1.49
UPK1AO00322 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 AL080312.2-201ENST00000613001 630 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 uc_338.29-201ENST00000615099 168 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 AC005899.7-201ENST00000618199 588 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.72□□□□□ -1.49
UPK1AO00322 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.72□□□□□ -1.49
UPK1AO00322 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UPK1AO00322 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
UPK1AO00322 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UPK1AO00322 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UPK1AO00322 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UPK1AO00322 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.72□□□□□ -1.49
UPK1AO00322 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
UPK1AO00322 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
UPK1AO00322 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
UPK1AO00322 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
UPK1AO00322 AC140479.2-201ENST00000421567 3130 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
UPK1AO00322 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UPK1AO00322 RNA5SP375-201ENST00000362975 119 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 RN7SKP250-201ENST00000363924 321 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
UPK1AO00322 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
UPK1AO00322 AC121334.1-201ENST00000396414 802 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 AC245096.1-201ENST00000413104 546 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 AL035422.1-201ENST00000414193 397 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.71□□□□□ -1.5
UPK1AO00322 PSMD10P2-201ENST00000432890 672 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 RN7SL352P-201ENST00000466002 277 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.71□□□□□ -1.5
UPK1AO00322 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
UPK1AO00322 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.71□□□□□ -1.5
UPK1AO00322 snoU109.5-201ENST00000516231 132 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 TPM3P3-201ENST00000521343 354 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.71□□□□□ -1.5
UPK1AO00322 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.71□□□□□ -1.5
UPK1AO00322 AC021269.1-201ENST00000526860 705 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.71□□□□□ -1.5
UPK1AO00322 BMS1P16-201ENST00000556075 1147 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 NPM1P5-201ENST00000557228 838 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.71□□□□□ -1.5
UPK1AO00322 AL078601.3-201ENST00000573303 535 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 AC004232.2-201ENST00000574245 821 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 RN7SL230P-201ENST00000580835 303 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.71□□□□□ -1.5
UPK1AO00322 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.71□□□□□ -1.5
UPK1AO00322 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.71□□□□□ -1.5
UPK1AO00322 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
UPK1AO00322 AC022325.1-201ENST00000502748 2199 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
UPK1AO00322 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
UPK1AO00322 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
UPK1AO00322 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.71□□□□□ -1.5
UPK1AO00322 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.71□□□□□ -1.5
UPK1AO00322 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UPK1AO00322 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
UPK1AO00322 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UPK1AO00322 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UPK1AO00322 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UPK1AO00322 AC092451.3-201ENST00000625067 1343 ntBASIC5.71□□□□□ -1.5
UPK1AO00322 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.71□□□□□ -1.5
UPK1AO00322 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPK1AO00322 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
UPK1AO00322 AC013268.3-201ENST00000262716 2324 ntBASIC5.7□□□□□ -1.5
UPK1AO00322 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.7□□□□□ -1.5
UPK1AO00322 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms