Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC068491.1-201ENST00000449539 1241 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 CTSLP6-201ENST00000458273 1002 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 PPP1R11P1-201ENST00000486095 376 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 HMGN1P17-201ENST00000513734 295 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 NPIPB14P-203ENST00000532298 987 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 RNU4ATAC-201ENST00000580972 127 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 MIR4271-201ENST00000582451 67 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 SMIM12P1-201ENST00000603004 274 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 AL137067.2-201ENST00000621202 131 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 SAMMSON-210ENST00000641260 1308 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AL360271.1-201ENST00000395679 510 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 VN1R12P-201ENST00000403778 876 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 SNORA11.5-201ENST00000408163 128 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 RN7SKP144-201ENST00000411108 279 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 RN7SKP108-201ENST00000411367 328 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AC112187.1-201ENST00000455837 479 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 RPL12P30-201ENST00000488389 499 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 RPL37P23-201ENST00000492641 294 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 RNU6-1334P-201ENST00000516032 105 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 OR6M2P-201ENST00000529831 871 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AC004232.2-201ENST00000574245 821 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AP005136.2-201ENST00000583253 1049 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AC020916.2-201ENST00000591242 360 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AC008555.7-201ENST00000605008 583 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AL109924.4-201ENST00000623089 670 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AL359091.1-201ENST00000449048 1734 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AC011416.1-201ENST00000514947 1732 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AC090220.1-201ENST00000593078 1699 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 AC024651.2-201ENST00000562480 2098 ntBASIC5.84□□□□□ -1.47
ATG4BQ9Y4P1 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
ATG4BQ9Y4P1 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
ATG4BQ9Y4P1 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.84□□□□□ -1.48
ATG4BQ9Y4P1 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 OR56A4-201ENST00000330728 1209 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 CXADRP1-201ENST00000398098 1095 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AL035422.1-201ENST00000414193 397 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AC108479.1-201ENST00000431142 427 ntBASIC5.83□□□□□ -1.48
ATG4BQ9Y4P1 AC117394.1-201ENST00000477323 567 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms