Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC027279.1-201ENST00000568885 4284 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 RNA5SP435-201ENST00000364044 108 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 RNA5SP478-201ENST00000364657 115 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 RN7SKP144-201ENST00000411108 279 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 RN7SKP108-201ENST00000411367 328 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 IPPKP1-201ENST00000422501 768 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AL133351.3-201ENST00000454998 193 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC018638.3-201ENST00000461273 132 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 RN7SL221P-201ENST00000466190 281 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC098847.1-201ENST00000473094 348 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 OR4D12P-201ENST00000509361 911 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC036111.2-201ENST00000533247 901 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC007346.1-201ENST00000569208 867 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AP005136.2-201ENST00000583253 1049 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC005332.4-201ENST00000592752 579 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC073389.3-201ENST00000609434 935 ntBASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA1Q9UND3 AC022034.1-201ENST00000512867 2156 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 FUNDC2P3-201ENST00000334716 533 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AP003170.5-201ENST00000397185 335 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 U3.43-201ENST00000410734 213 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 UBE2V1P14-201ENST00000415815 558 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AC007568.1-201ENST00000422912 471 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AL590004.3-202ENST00000445883 451 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 OR7E99P-201ENST00000505750 922 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 KHDC1P1-201ENST00000511053 508 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 COX6B1P4-201ENST00000519826 484 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AC008507.3-201ENST00000585753 472 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AL049840.6-201ENST00000604583 345 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AC018690.1-201ENST00000608144 626 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AC092266.1-201ENST00000610958 165 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AL080312.2-201ENST00000613001 630 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AL096712.1-201ENST00000614561 159 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AL731532.1-201ENST00000623972 4236 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 AC006511.3-201ENST00000624929 1783 ntBASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NPIPA1Q9UND3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms