Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 AL078601.3-201ENST00000573303 535 ntBASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 OR7A1P-202ENST00000641542 1158 ntBASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
CTNNA3Q9UI47 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CTNNA3Q9UI47 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CTNNA3Q9UI47 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 AC027575.3-201ENST00000583058 2747 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 AP000432.2-201ENST00000624164 2048 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 OR3D1P-201ENST00000438288 955 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 AL590004.3-202ENST00000445883 451 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 RPL7L1P3-201ENST00000455249 689 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 RPL12P30-201ENST00000488389 499 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 OR4A40P-201ENST00000533878 948 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 AC092865.1-201ENST00000544395 1023 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 MIR4420-201ENST00000583944 77 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 SMIM12P1-201ENST00000603004 274 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 AL109924.4-201ENST00000623089 670 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 AC092070.2-203ENST00000598377 3644 ntBASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CTNNA3Q9UI47 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AC011416.1-201ENST00000514947 1732 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 IFIT1P1-201ENST00000400497 1449 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 RBBP4P5-201ENST00000398583 1266 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AC092865.3-201ENST00000425390 1026 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 NAP1L4P2-201ENST00000425958 899 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 DNAJC19P5-201ENST00000443295 316 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AP002453.1-201ENST00000492327 668 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AC091874.2-201ENST00000505889 720 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AC112484.3-201ENST00000505910 329 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 HNRNPCP1-201ENST00000556181 766 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AC002310.3-201ENST00000569728 723 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AC007448.1-201ENST00000582714 234 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 MIR6862-1-201ENST00000613016 70 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 MIR6862-2-201ENST00000614755 70 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 uc_338.31-201ENST00000615595 186 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 MIR6721-201ENST00000617181 87 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AC025262.3-201ENST00000623666 360 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 AC008691.1-209ENST00000642094 814 ntBASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CTNNA3Q9UI47 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 YWHAZP6-201ENST00000399764 738 ntBASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 RN7SKP151-201ENST00000410230 316 ntBASIC7.37□□□□□ -1.23
CTNNA3Q9UI47 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms