Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 THAP12P9-201ENST00000503971 2360 ntBASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS29Q9UBQ0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 FUNDC2P3-201ENST00000334716 533 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 OR10R3P-201ENST00000361688 942 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 RN7SKP184-201ENST00000362348 333 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 MIR191-201ENST00000384873 92 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 RN7SKP146-201ENST00000410242 334 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 RPL7AP51-201ENST00000422016 760 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC130360.1-201ENST00000425489 1117 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 NPM1P25-201ENST00000429734 854 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 ZNF619P1-201ENST00000446539 752 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC016027.4-201ENST00000450866 277 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 KF459542.1-201ENST00000450908 553 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC002553.3-201ENST00000453002 341 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC002075.1-201ENST00000457396 676 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC005017.1-201ENST00000482002 490 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 TRBV5-2-201ENST00000489095 273 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC083795.1-201ENST00000491760 320 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AP002453.1-201ENST00000492327 668 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC130365.2-201ENST00000525882 1201 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AL645933.2-201ENST00000606743 1207 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AL080312.2-201ENST00000613001 630 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC023632.6-201ENST00000624338 2177 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC119674.1-202ENST00000641333 1860 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 MAPK10-350ENST00000641777 965 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 AC007159.1-201ENST00000566529 4706 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 ZNF402P-201ENST00000404435 3100 ntBASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
VPS29Q9UBQ0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
VPS29Q9UBQ0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.77□□□□□ -1.48
VPS29Q9UBQ0 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 RN7SKP108-201ENST00000411367 328 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 RPL12P16-201ENST00000431098 498 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 RPS3AP38-201ENST00000435889 763 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 TRIM60P16-201ENST00000444048 694 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 GUSBP9-201ENST00000510138 584 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 AC108103.1-201ENST00000511286 446 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 TOMM22P4-201ENST00000511318 336 ntBASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VPS29Q9UBQ0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms