Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 TPT1P3-201ENST00000492841 512 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 RN7SL187P-201ENST00000495587 303 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 SNX18P23-201ENST00000510867 677 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC011352.2-201ENST00000514574 1016 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 RNA5SP96-201ENST00000516041 107 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC091163.3-201ENST00000518269 1144 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC087752.2-201ENST00000521219 281 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 PHBP2-201ENST00000532859 806 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC027667.1-201ENST00000545814 304 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AL109628.1-201ENST00000556877 366 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC010735.1-201ENST00000567305 1026 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC027455.1-201ENST00000574104 594 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 RN7SL32P-201ENST00000580514 281 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC091057.2-201ENST00000602594 792 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC073333.2-201ENST00000603589 769 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 QTRT1P1-201ENST00000604344 1078 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AL137000.1-201ENST00000610528 1244 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC100847.1-201ENST00000611316 481 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AL356752.1-201ENST00000615844 593 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC025287.2-201ENST00000621911 668 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC106782.7-201ENST00000624024 418 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 AC133555.5-201ENST00000624430 418 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 SNORA16A-202ENST00000628458 135 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 LCOR-201ENST00000286067 4542 ntBASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PPARGC1AQ9UBK2 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AL929601.4-201ENST00000613011 1341 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 TATDN2P3-201ENST00000452855 3665 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 CCAT2-201ENST00000630920 1752 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 SLC20A1P1-201ENST00000413906 956 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 TATDN1P1-201ENST00000414123 891 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 TXNL1P1-201ENST00000429528 554 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 RPL3P11-201ENST00000434028 1146 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 FABP5P3-201ENST00000437960 408 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AC092647.3-201ENST00000443044 633 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 VN1R25P-201ENST00000443385 738 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 KATNBL1P3-201ENST00000443475 909 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 RAB28P3-201ENST00000448325 597 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 RN7SL372P-201ENST00000461982 298 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AC017007.1-201ENST00000511960 415 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 KCTD9P6-201ENST00000522306 950 ntBASIC7.03□□□□□ -1.28
PPARGC1AQ9UBK2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms