Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 FANCD2P2-201ENST00000437591 1400 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 OR7A2P-201ENST00000304105 930 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AC013403.1-201ENST00000436954 263 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 RPEP4-201ENST00000437636 602 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 RPSAP40-201ENST00000442343 891 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AL445991.1-201ENST00000450381 475 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 RAB28P2-201ENST00000454299 641 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AP003385.3-201ENST00000472498 287 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AC090589.1-201ENST00000473109 362 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AP000619.2-201ENST00000546014 969 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 MIR4732-201ENST00000581873 76 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 RN7SL66P-201ENST00000582099 264 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AC125494.2-201ENST00000602431 657 ntBASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 PPBPP2-201ENST00000513150 1362 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 RN7SKP128-201ENST00000364270 303 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 ARSFP1-201ENST00000398758 477 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 RPL12P23-201ENST00000405880 490 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AL033519.1-201ENST00000407266 307 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 RN7SKP221-201ENST00000410420 301 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 GPN3P1-201ENST00000423883 535 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 COL11A2P1-205ENST00000441798 676 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 RN7SL83P-201ENST00000468131 297 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC090602.1-201ENST00000469695 252 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC010343.2-201ENST00000510162 224 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC090958.1-201ENST00000511122 351 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC037479.1-201ENST00000558361 625 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC004805.3-201ENST00000603178 310 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC006924.1-201ENST00000610750 559 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AC079776.5-201ENST00000641920 211 ntBASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNB1IP1Q9NPC3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms