Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 SCARNA11.1-201ENST00000516918 132 ntBASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 RN7SKP98-201ENST00000517070 156 ntBASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 OR4A21P-201ENST00000532759 944 ntBASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 NXPE2P1-201ENST00000543705 726 ntBASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AL109628.1-201ENST00000556877 366 ntBASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC068020.1-201ENST00000594215 661 ntBASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC008536.1-201ENST00000602872 669 ntBASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC130352.1-201ENST00000602979 661 ntBASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC026951.2-201ENST00000613847 241 ntBASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC116165.3-201ENST00000614524 400 ntBASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC104837.1-201ENST00000444644 1587 ntBASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 OLMALINC-203ENST00000641087 3779 ntBASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM39Q9HCM9 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AL132640.2-201ENST00000559968 1698 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC092451.3-201ENST00000625067 1343 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 RNA5SP105-201ENST00000391123 113 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 RPL7P27-201ENST00000403775 720 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC107081.1-201ENST00000414975 361 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 MTCYBP12-201ENST00000440559 1134 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 CR769776.1-201ENST00000441254 787 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 OR10R1P-201ENST00000441524 1141 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 Z83846.1-201ENST00000446798 265 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC093166.2-201ENST00000455969 1017 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 NMNAT1P3-201ENST00000457517 888 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 RPL6P9-201ENST00000466502 859 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC021074.2-201ENST00000468434 172 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC122714.1-201ENST00000502510 459 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 MTCYBP35-201ENST00000503630 1137 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 PABPC1P1-201ENST00000506347 591 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC093325.1-201ENST00000508378 326 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC008868.1-201ENST00000509786 737 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC023824.3-201ENST00000569003 562 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AL591222.2-201ENST00000604443 754 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC114878.2-201ENST00000604863 1251 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC021755.4-201ENST00000616620 456 ntBASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM39Q9HCM9 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms