Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
CCDC85AQ96PX6 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
CCDC85AQ96PX6 POMP-202ENST00000460403 1428 ntTSL 3 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 AC061975.5-201ENST00000584928 1441 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.82□□□□□ -1
CCDC85AQ96PX6 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CCDC85AQ96PX6 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CCDC85AQ96PX6 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CCDC85AQ96PX6 RNFT1P3-201ENST00000340898 1052 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 ANKRD36P1-201ENST00000344424 659 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 TRAV35-201ENST00000390462 330 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 HSPD1P16-201ENST00000402302 394 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 FCF1P9-201ENST00000412546 282 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 AL133325.1-201ENST00000421090 382 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 RPL5P4-201ENST00000434805 886 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 PPIA-203ENST00000451562 544 ntTSL 2 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 RNU2-30P-201ENST00000516209 141 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 RNU6ATAC39P-201ENST00000516309 149 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 OR5G4P-201ENST00000525251 760 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 AC090286.3-201ENST00000573133 187 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 AC091135.1-201ENST00000585943 307 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 AC011447.2-201ENST00000592921 283 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 CDY19P-201ENST00000411668 1613 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 CDY18P-201ENST00000438294 1609 ntBASIC8.82□□□□□ -1
CCDC85AQ96PX6 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CCDC85AQ96PX6 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.82□□□□□ -1
CCDC85AQ96PX6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.82□□□□□ -1
CCDC85AQ96PX6 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.82□□□□□ -1
CCDC85AQ96PX6 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
CCDC85AQ96PX6 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.81□□□□□ -1
CCDC85AQ96PX6 AL133268.1-201ENST00000405676 1401 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.81□□□□□ -1
CCDC85AQ96PX6 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
CCDC85AQ96PX6 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 TANK-206ENST00000406287 875 ntTSL 5 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC018804.1-201ENST00000430381 618 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 NANOGP2-201ENST00000435391 727 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 RPL12P49-201ENST00000441100 121 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC068135.1-201ENST00000446164 246 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 NDUFA5P5-201ENST00000468361 342 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 RPL12P7-201ENST00000493832 494 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC119751.1-201ENST00000513357 765 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 RNU6-319P-201ENST00000516025 108 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 RN7SKP11-201ENST00000517018 287 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 MAL2-207ENST00000522828 603 ntTSL 3 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC104417.1-201ENST00000523974 751 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 PDCL2P2-201ENST00000533651 189 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 BTG1P1-201ENST00000540396 508 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC090115.2-201ENST00000548060 883 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 AL133241.1-201ENST00000556832 487 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC234778.2-201ENST00000566241 354 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC8.81□□□□□ -1
CCDC85AQ96PX6 AL008582.1-201ENST00000609612 442 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 MIR6889-201ENST00000613185 59 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC073968.1-201ENST00000618594 637 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.81□□□□□ -1
CCDC85AQ96PX6 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CCDC85AQ96PX6 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms